C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543780 IGJ-201 ENSG00000132465 9606 - 4:70655544-70666631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543780
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543780 3.698±0.00 802.228±0.00 0.205±0.15 171.530±22.12 242.994±130.04 3.574±2.58 8.533±3.65 4.526±0.88 200.742±33.10 0.098±0.00 57.103±0.00 0.578±0.24 0.919±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M2 CIL_0000M2_0001 CGP 4:70592256-70686816
CIL_0000M1 CIL_0000M1_0001 CGP 4:70628744-70686816
CIL_0000D5 CIL_0000D5_0001 CGP 4:70655541-70690551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IEP retina homeostasis
GO:0002250 IDA adaptive immune response
GO:0003094 IMP glomerular filtration
GO:0003697 IDA single-stranded DNA binding
GO:0003823 NAS antigen binding
GO:0005576 NAS extracellular region
GO:0005615 IDA extracellular space
GO:0006955 NAS immune response
GO:0019731 IDA antibacterial humoral response
GO:0019862 IMP IgA binding
GO:0031210 IDA phosphatidylcholine binding
GO:0032461 IMP positive regulation of protein oligomerization
GO:0034987 IMP immunoglobulin receptor binding
GO:0042803 IDA protein homodimerization activity
GO:0042834 IDA peptidoglycan binding
GO:0045087 IDA innate immune response
GO:0060267 IDA positive regulation of respiratory burst
GO:0070062 IDA extracellular vesicular exosome
GO:0071748 IDA monomeric IgA immunoglobulin complex
GO:0071750 IMP dimeric IgA immunoglobulin complex
GO:0071751 IDA secretory IgA immunoglobulin complex
GO:0071752 IDA secretory dimeric IgA immunoglobulin complex
GO:0071756 IDA pentameric IgM immunoglobulin complex
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087033 Igj-001 protein_coding Mus_musculus 0 527
ENSMUST00000164073 Igj-002 protein_coding Mus_musculus 0 364

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