C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chaperonin containing TCP1, subunit 4 (delta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544079 CCT4-201 ENSG00000115484 9606 - 2:61868125-61888671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544079
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544079 14.385±0.00 4.827±0.00 11.231±4.21 6.272±2.26 13.180±9.20 5.789±4.23 12.702±8.14 9.630±1.45 11.265±3.49 12.708±2.97 55.382±49.64 32.209±28.01 61.153±42.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RH CIL_0000RH_0002 CGP 2:61824854-61888804

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020562 Cct4-004 protein_coding Mus_musculus 0 2056
ENSMUST00000173867 Cct4-001 protein_coding Mus_musculus 0 1906
ENSMUST00000174244 Cct4-003 retained_intron Mus_musculus 0 876
ENSMUST00000174689 Cct4-009 retained_intron Mus_musculus 0 377
ENSMUST00000174659 Cct4-006 nonsense_mediated_decay Mus_musculus 0 292
ENSMUST00000174047 Cct4-008 nonsense_mediated_decay Mus_musculus 0 244
ENSMUST00000145912 Cct4-002 processed_transcript Mus_musculus 0 226
ENSMUST00000117570 Gm15495-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000173853 Cct4-005 nonsense_mediated_decay Mus_musculus 2.00386e-43 182

Loading