C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546010 STAT5A-008 ENSG00000126561 9606 + 17:42288076-42310927 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006I7 CIL_0006I7_0001 CGP 17:42199168-42311943
CIL_0006IK CIL_0006IK_0001 CGP 17:42287547-42388568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000255 ISS allantoin metabolic process
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005829 TAS cytosol
GO:0006101 ISS citrate metabolic process
GO:0006103 ISS 2-oxoglutarate metabolic process
GO:0006105 ISS succinate metabolic process
GO:0006107 ISS oxaloacetate metabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006549 ISS isoleucine metabolic process
GO:0006573 ISS valine metabolic process
GO:0006600 ISS creatine metabolic process
GO:0006631 ISS fatty acid metabolic process
GO:0007165 IEA signal transduction
GO:0007259 TAS JAK-STAT cascade
GO:0019530 ISS taurine metabolic process
GO:0038161 ISS prolactin signaling pathway
GO:0040014 ISS regulation of multicellular organism growth
GO:0046449 ISS creatinine metabolic process
GO:0060397 TAS JAK-STAT cascade involved in growth hormone signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107356 Stat5a-002 protein_coding Mus_musculus 0 2649
ENSMUST00000004145 Stat5a-001 protein_coding Mus_musculus 0 2649
ENSMUST00000107357 Stat5a-201 protein_coding Mus_musculus 0 2326
ENSMUST00000004143 Stat5b-001 protein_coding Mus_musculus 0 2183
ENSMUST00000107358 Stat5b-002 protein_coding Mus_musculus 0 2183
ENSMUST00000138083 Stat5a-005 protein_coding Mus_musculus 0 573
ENSMUST00000154087 Stat5a-003 processed_transcript Mus_musculus 0 424
ENSMUST00000135272 Stat5a-006 processed_transcript Mus_musculus 0 416
ENSMUST00000126266 Stat5b-003 processed_transcript Mus_musculus 0 296

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