C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: brain-specific angiogenesis inhibitor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546190 BAI3-201 ENSG00000135298 9606 + 6:68638676-69388891 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000546190
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000546190 0.088±0.00 6.450±2.98 0.152±0.11 0.762±0.00 0.593±0.00 0.264±0.15 1.401±0.00 0.685±0.43 0.098±0.00 0.168±0.05 0.068±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061Z CIL_00061Z_0002 CGP 6:68635367-69797111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA:TAS G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016525 IEA negative regulation of angiogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041838 Bai3-201 protein_coding Mus_musculus 0 6505
ENSMUST00000151309 Bai3-001 protein_coding Mus_musculus 0 6505
ENSMUST00000135518 Bai3-008 protein_coding Mus_musculus 0 6505
ENSMUST00000146592 Bai3-002 protein_coding Mus_musculus 0 3600
ENSMUST00000126626 Bai3-006 protein_coding Mus_musculus 0 2983
ENSMUST00000126096 Bai3-003 retained_intron Mus_musculus 0 2512
ENSMUST00000189254 Bai3-010 retained_intron Mus_musculus 0 2130
ENSMUST00000153568 Bai3-004 retained_intron Mus_musculus 0 1808
ENSDART00000132691 bai3-001 protein_coding Danio_rerio 0 1491
ENSDART00000126945 bai3-202 protein_coding Danio_rerio 0 889
ENSMUST00000134022 Bai3-005 retained_intron Mus_musculus 0 503
ENSDART00000145777 bai3-003 protein_coding Danio_rerio 0 287
ENSMUST00000154102 Bai3-007 processed_transcript Mus_musculus 0 195

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