C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: superoxide dismutase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546260 SOD2-012 ENSG00000112096 9606 - 6:159679064-159693241 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000546260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000546260 398.472±0.00 156.274±0.00 17.397±0.00 57.373±29.19 89.821±28.32 115.518±93.31 96.500±64.72 314.197±273.43 70.571±22.75 167.807±126.40 27.269±0.00 102.214±60.94 25.591±8.72 76.519±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089P CIL_00089P_0001 VISTA 6:159654795-160257694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004784 IEA superoxide dismutase activity
GO:0006801 IEA superoxide metabolic process
GO:0019430 IEA removal of superoxide radicals
GO:0046872 IEA metal ion binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007012 Sod2-201 protein_coding Mus_musculus 0 544

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