C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546262 RNF10-018 ENSG00000022840 9606 + 12:120560844-120566894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastTestisENST00000546262
Transcript ID Brain Breast Testis
ENST00000546262 59.930±0.00 49.063±0.00 94.187±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841
CIL_00075W CIL_00075W_0002 CGP 12:120533480-120581398

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139853 Rnf10-009 nonsense_mediated_decay Mus_musculus 0 704
ENSMUST00000112096 Rnf10-001 protein_coding Mus_musculus 0 704
ENSMUST00000040555 Rnf10-003 protein_coding Mus_musculus 0 704
ENSMUST00000112097 Rnf10-002 protein_coding Mus_musculus 0 704
ENSMUST00000152613 Rnf10-004 processed_transcript Mus_musculus 3e-27 126

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