C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 41, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547967 RNF41-005 ENSG00000181852 9606 - 12:56205450-56221866 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000547967
Transcript ID Testis
ENST00000547967 1.608±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0031386 IEA protein tag

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171342 Rnf41-202 protein_coding Mus_musculus 0 723
ENSMUST00000096386 Rnf41-201 protein_coding Mus_musculus 0 723
ENSMUST00000122221 Gm4772-001 processed_pseudogene Mus_musculus 6e-24 117
ENSMUST00000121507 Gm8761-001 processed_pseudogene Mus_musculus 3e-22 111

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