C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Rac GTPase activating protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000548644  |
RACGAP1-009 |
ENSG00000161800 |
9606 | - |
12:50004234-50025451  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0001 | VISTA | 12:49905565-50507504 |
| CIL_0008CC | CIL_0008CC_0001 | VISTA | 12:49906068-50507455 |
| CIL_000720 | CIL_000720_0001 | CGP | 12:49961870-49977139 |
| CIL_00071X | CIL_00071X_0001 | CGP | 12:49967194-50033136 |
| CIL_00071Y | CIL_00071Y_0001 | CGP | 12:49976923-50083611 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0038032 | IEA | termination of G-protein coupled receptor signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000169810
|
Racgap1-011 | protein_coding | Mus_musculus | 0 | 516 |
|
ENSMUST00000023756
|
Racgap1-002 | protein_coding | Mus_musculus | 0 | 516 |
|
ENSMUST00000171702
|
Racgap1-001 | protein_coding | Mus_musculus | 0 | 516 |
|
ENSMUST00000165730
|
Racgap1-010 | nonsense_mediated_decay | Mus_musculus | 0 | 481 |
|
ENSMUST00000164983
|
Racgap1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 436 |
|
ENSMUST00000168065
|
Racgap1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 433 |
|
ENSMUST00000171017
|
Racgap1-007 | retained_intron | Mus_musculus | 0 | 276 |
|
ENSMUST00000170369
|
Racgap1-003 | retained_intron | Mus_musculus | 8e-27 | 124 |
