C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B 19kDa interacting protein 3 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550043 BNIP3P1-002 ENSG00000197358 9606 + 14:28264390-28265974 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMusclePlacentaTestisENST00000550043
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000550043 0.187±0.00 0.216±0.00 0.053±0.00 0.006±0.00 0.006±0.00 0.018±0.00 0.041±0.03 0.008±0.00 0.038±0.00 0.559±0.00 0.037±0.00 0.035±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098P CIL_00098P_0001 VISTA 14:27830390-28431263

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106112 Bnip3-001 protein_coding Mus_musculus 0 763
ENSMUST00000100687 Gm16439-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000130500 Bnip3-004 processed_transcript Mus_musculus 0 621
ENSMUST00000121165 Gm14506-001 processed_pseudogene Mus_musculus 0 571
ENSMUST00000148970 Bnip3-003 processed_transcript Mus_musculus 0 213
ENSMUST00000118706 Gm15936-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000125359 Bnip3-002 processed_transcript Mus_musculus 8e-31 139

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