C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL2/adenovirus E1B interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130500 Bnip3-004 ENSMUSG00000078566 10090 - 7:138894281-138909495 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryTestisENSMUST00000130500
Transcript ID Colon Liver Ovary Testis
ENSMUST00000130500 2.454±1.64 26.955±21.04 7.237±0.00 0.332±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0003 CGP 7:138846079-138909519
CIL_0001LG CIL_0001LG_0002 CGP 7:138890836-139083976

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368636 BNIP3-001 protein_coding Homo_sapiens 0 634
ENST00000540159 BNIP3-002 protein_coding Homo_sapiens 0 647
ENST00000547295 BNIP3P1-001 transcribed_processed_pseudogene Homo_sapiens 0 621
ENST00000550043 BNIP3P1-002 processed_transcript Homo_sapiens 0 621
ENST00000599968 BNIP3P13-001 processed_pseudogene Homo_sapiens 0 274
ENST00000600827 BNIP3P26-001 processed_pseudogene Homo_sapiens 0 274
ENST00000601077 BNIP3P39-001 processed_pseudogene Homo_sapiens 0 254
ENST00000601729 AC006539.3-001 processed_pseudogene Homo_sapiens 0 326

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