C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock 70kDa protein 8 pseudogene 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552265 HSPA8P14-001 ENSG00000257539 9606 + 12:111381867-111385638 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungMuscleOvaryPlacentaTestisENST00000552265
Transcript ID Adrenal Brain Breast Kidney Lung Muscle Ovary Placenta Testis
ENST00000552265 0.063±0.00 0.042±0.00 0.096±0.00 0.007±0.00 0.153±0.00 0.006±0.00 0.153±0.00 0.073±0.00 0.037±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0001 VISTA 12:110911282-111513646

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117405 Gm15459-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000117557 Hspa8-003 protein_coding Mus_musculus 0 654
ENSMUST00000015800 Hspa8-001 protein_coding Mus_musculus 0 654
ENSMUST00000187358 RP23-241J21.1-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000153847 Hspa8-006 processed_transcript Mus_musculus 0 405
ENSMUST00000120949 Gm9436-001 processed_pseudogene Mus_musculus 0 379
ENSMUST00000190856 RP24-302H24.1-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000149936 Hspa8-002 retained_intron Mus_musculus 0 329
ENSMUST00000188705 RP23-76C10.2-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000122434 Gm13437-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000127699 Hspa8-008 retained_intron Mus_musculus 0 285
ENSMUST00000140984 Hspa8-007 retained_intron Mus_musculus 0 246

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