C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015800 Hspa8-001 ENSMUSG00000015656 10090 + 9:40800984-40805200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015800
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015800 126.257±23.77 326.438±48.46 437.264±18.29 75.129±22.23 56.577±8.79 122.227±40.03 189.573±30.82 292.862±236.39 58.293±5.65 202.608±16.56 117.318±71.48 508.270±206.33 19.341±0.63

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IEA ubiquitin ligase complex
GO:0000974 ISS Prp19 complex
GO:0001664 IEA G-protein coupled receptor binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005615 IEA extracellular space
GO:0005622 IDA intracellular
GO:0005634 ISS nucleus
GO:0005681 IEA spliceosomal complex
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006200 IDA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0006457 IDA protein folding
GO:0006950 IEA response to stress
GO:0008380 IEA RNA splicing
GO:0016020 IEA membrane
GO:0016887 IEA ATPase activity
GO:0019899 IEA enzyme binding
GO:0023026 IEA MHC class II protein complex binding
GO:0030529 ISS ribonucleoprotein complex
GO:0031072 IEA heat shock protein binding
GO:0031625 IEA ubiquitin protein ligase binding
GO:0042026 IEA protein refolding
GO:0042623 IDA ATPase activity, coupled
GO:0044822 IEA poly(A) RNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0048026 IMP positive regulation of mRNA splicing, via spliceosome
GO:0051082 IPI unfolded protein binding
GO:0051085 IGI chaperone mediated protein folding requiring cofactor
GO:0051726 IDA regulation of cell cycle
GO:0070062 IDA extracellular vesicular exosome
GO:0072318 IGI clathrin coat disassembly
GO:0072562 IEA blood microparticle
GO:1902904 IEA negative regulation of fibril organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099994 hspa8-001 protein_coding Danio_rerio 0 1812
ENSDART00000043743 HSPA8 (1 of 2)-001 protein_coding Danio_rerio 0 1591
ENSDART00000132212 hspa8-002 protein_coding Danio_rerio 0 488
ENSDART00000152740 HSPA8 (1 of 2)-002 processed_transcript Danio_rerio 0 281
ENSDART00000141549 hspa8-003 protein_coding Danio_rerio 0 270
ENST00000227378 HSPA8-006 protein_coding Homo_sapiens 0 2488
ENST00000309758 HSPA6-001 protein_coding Homo_sapiens 0 887
ENST00000375654 HSPA1L-001 protein_coding Homo_sapiens 0 1068
ENST00000383390 HSPA1L-001 protein_coding Homo_sapiens 0 1074
ENST00000397642 RP11-488L18.1-001 processed_pseudogene Homo_sapiens 0 2054
ENST00000417601 HSPA1L-001 protein_coding Homo_sapiens 0 1068
ENST00000419827 HSPA8P8-001 processed_pseudogene Homo_sapiens 0 1317
ENST00000425843 HSPA8P1-001 processed_pseudogene Homo_sapiens 0 2015
ENST00000426095 HSPA1L-001 protein_coding Homo_sapiens 0 1068
ENST00000443628 HSPA8P7-001 processed_pseudogene Homo_sapiens 0 1901
ENST00000445535 HSPA7-001 unprocessed_pseudogene Homo_sapiens 0 773
ENST00000448737 HSPA8P20-001 processed_pseudogene Homo_sapiens 0 484
ENST00000453788 HSPA8-002 protein_coding Homo_sapiens 0 1901
ENST00000454171 HSPA8P16-001 processed_pseudogene Homo_sapiens 0 898
ENST00000456772 HSPA1L-001 protein_coding Homo_sapiens 0 1074
ENST00000456928 HSPA8P5-001 processed_pseudogene Homo_sapiens 0 1408
ENST00000485881 HSPA8P9-001 processed_pseudogene Homo_sapiens 0 2025
ENST00000508840 HSPA8P11-001 unprocessed_pseudogene Homo_sapiens 0 442
ENST00000511877 HSPA8P4-001 processed_pseudogene Homo_sapiens 0 1467
ENST00000524552 HSPA8-027 protein_coding Homo_sapiens 0 983
ENST00000524590 HSPA8-024 protein_coding Homo_sapiens 0 505
ENST00000525463 HSPA8-018 protein_coding Homo_sapiens 0 396
ENST00000525624 HSPA8-011 protein_coding Homo_sapiens 0 713
ENST00000526110 HSPA8-009 protein_coding Homo_sapiens 0 1908
ENST00000526686 HSPA8-028 protein_coding Homo_sapiens 0 568
ENST00000526862 HSPA8-026 processed_transcript Homo_sapiens 0 558
ENST00000527387 HSPA8-012 protein_coding Homo_sapiens 0 665
ENST00000527983 HSPA8-008 retained_intron Homo_sapiens 0 1533
ENST00000528292 HSPA8-015 protein_coding Homo_sapiens 0 1328
ENST00000530391 HSPA8-022 protein_coding Homo_sapiens 0 496
ENST00000531063 HSPA8-013 retained_intron Homo_sapiens 0 257
ENST00000532091 HSPA8-025 retained_intron Homo_sapiens 0 1232
ENST00000532167 HSPA8-016 retained_intron Homo_sapiens 0 259
ENST00000532182 HSPA8-021 protein_coding Homo_sapiens 0 645
ENST00000532636 HSPA8-004 protein_coding Homo_sapiens 0 2486
ENST00000532780 HSPA8-007 retained_intron Homo_sapiens 0 713
ENST00000533238 HSPA8-014 processed_transcript Homo_sapiens 0 387
ENST00000533540 HSPA8-003 protein_coding Homo_sapiens 0 1528
ENST00000534319 HSPA8-010 protein_coding Homo_sapiens 0 1986
ENST00000534567 HSPA8-023 protein_coding Homo_sapiens 0 699
ENST00000534624 HSPA8-001 protein_coding Homo_sapiens 0 2588
ENST00000552265 HSPA8P14-001 processed_pseudogene Homo_sapiens 0 654

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