C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552481 RP11-669B18.1-001 ENSG00000257199 9606 - 12:76984079-76984669 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LungTestisENST00000552481
Transcript ID Lung Testis
ENST00000552481 0.332±0.00 2.377±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BB CIL_0002BB_0002 CGP 12:76858715-77065580

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183528 RANBP1-001 protein_coding Mus_musculus 0 534
ENSMUST00000115645 Ranbp1-001 protein_coding Mus_musculus 0 534
ENSMUST00000185058 RANBP1-003 protein_coding Mus_musculus 0 512
ENSMUST00000052325 Ranbp1-003 protein_coding Mus_musculus 0 512
ENSMUST00000121155 Gm5391-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000184634 RANBP1-004 retained_intron Mus_musculus 0 285
ENSMUST00000123073 Ranbp1-004 retained_intron Mus_musculus 0 285
ENSMUST00000185140 RANBP1-002 processed_transcript Mus_musculus 0 255
ENSMUST00000134035 Ranbp1-002 processed_transcript Mus_musculus 0 255

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