C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: periphilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552761 PPHLN1-007 ENSG00000134283 9606 + 12:42326171-42441543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastLiverMuscleOvaryPlacentaENST00000552761
Transcript ID Adrenal Bladder Breast Liver Muscle Ovary Placenta
ENST00000552761 14.305±0.00 4.083±0.00 6.142±0.00 5.443±0.00 3.471±0.00 11.064±0.00 8.121±2.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0031424 IEA keratinization
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068457 Pphln1-202 protein_coding Mus_musculus 0 942
ENSMUST00000049122 Pphln1-201 protein_coding Mus_musculus 0 856
ENSMUST00000165935 Pphln1-204 protein_coding Mus_musculus 0 542
ENSMUST00000109256 Pphln1-203 protein_coding Mus_musculus 0 542

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