C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinal degeneration 3-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557640 RD3L-001 ENSG00000227729 9606 - 14:103940426-103942308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverPlacentaTestisENST00000557640
Transcript ID Heart Kidney Liver Placenta Testis
ENST00000557640 3.823±2.83 0.068±0.00 0.086±0.04 0.116±0.00 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X8 CIL_0006X8_0001 CGP 14:103912288-104052667
CIL_0006X7 CIL_0006X7_0001 CGP 14:103928462-104052667
CIL_0006X6 CIL_0006X6_0001 CGP 14:103940426-104115581

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190536 Rd3l-003 protein_coding Mus_musculus 0 586
ENSMUST00000189759 Rd3l-001 protein_coding Mus_musculus 0 514
ENSMUST00000170525 Rd3l-004 protein_coding Mus_musculus 0 510
ENSMUST00000190680 Rd3l-005 protein_coding Mus_musculus 0 285
ENSMUST00000185354 Rd3l-002 protein_coding Mus_musculus 7.00649e-45 185

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