C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006X6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000227729-ENSG00000166183 CGP 9606 14:103940426-104115581
GeneTranscriptPositionBiotype
ENSG00000156414 (TDRD9)
tudor domain containing 9 		ENST00000339063 (TDRD9-201) 103970607-104052212 protein_coding
ENST00000409874 (TDRD9-001) 103928462-104052667 protein_coding
ENST00000462273 (TDRD9-003) 104049418-104052665 retained_intron
ENST00000466378 (TDRD9-005) 104005156-104007180 retained_intron
ENST00000481318 (TDRD9-006) 104049425-104052281 retained_intron
ENST00000496087 (TDRD9-004) 103928817-103965481 processed_transcript
ENST00000554571 (TDRD9-008) 103939800-103966828 processed_transcript
ENST00000557332 (TDRD9-007) 103970597-104052665 protein_coding
ENSG00000166183 (ASPG)
asparaginase 		ENST00000546892 (ASPG-005) 104085691-104112633 protein_coding
ENST00000548372 (ASPG-003) 104085686-104107235 retained_intron
ENST00000549809 (ASPG-006) 104104929-104107233 processed_transcript
ENST00000550583 (ASPG-002) 104107230-104112588 protein_coding
ENST00000551170 (ASPG-008) 104093491-104105382 protein_coding
ENST00000551177 (ASPG-001) 104085679-104115581 protein_coding
ENST00000551871 (ASPG-004) 104111621-104112708 retained_intron
ENST00000552126 (ASPG-007) 104104962-104107219 processed_transcript
ENST00000556267 (ASPG-009) 104104983-104105344 processed_transcript
ENSG00000227729 (RD3L)
retinal degeneration 3-like 		ENST00000557640 (RD3L-001) 103940426-103942308 protein_coding
ENSG00000242894 (RN7SL634P)
RNA, 7SL, cytoplasmic 634, pseudogene 		ENST00000485467 (RN7SL634P-201) 104013642-104013933 misc_RNA
ENSG00000264439 (AL136001.1)
 ENST00000580575 (AL136001.1-201) 103980798-103980883 miRNA
CIL_0006X6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000091402-ENSMUSG00000037686 CGP 10090 12:111979111-112127573
GeneTranscriptPositionBiotype
ENSMUSG00000037686 (Aspg)
asparaginase homolog (S. cerevisiae) 		ENSMUST00000079400 (Aspg-201) 112106683-112127573 protein_coding
ENSMUSG00000054003 (Tdrd9)
tudor domain containing 9 		ENSMUST00000079009 (Tdrd9-201) 111971559-112068854 protein_coding
ENSMUSG00000091402 (Rd3l)
retinal degeneration 3-like 		ENSMUST00000170525 (Rd3l-004) 111979189-111980469 protein_coding
ENSMUST00000185354 (Rd3l-002) 111979191-111981102 protein_coding
ENSMUST00000189759 (Rd3l-001) 111979111-111981317 protein_coding
ENSMUST00000190536 (Rd3l-003) 111979145-111981054 protein_coding
ENSMUST00000190680 (Rd3l-005) 111979112-111980143 protein_coding
ENSMUSG00000093090 (Mir3073a)
microRNA 3073a 		ENSMUST00000175349 (Mir3073a-201) 112109238-112109322 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X6_0001ENSG00000156414ENST00000339063ENST00000409874ENST00000462273ENST00000466378ENST00000481318ENST00000496087ENST00000554571ENST00000557332ENSG00000166183ENST00000546892ENST00000548372ENST00000549809ENST00000550583ENST00000551170ENST00000551177ENST00000551871ENST00000552126ENST00000556267ENSG00000227729ENST00000557640ENSG00000242894ENST00000485467ENSG00000264439ENST00000580575CIL_0006X6_0002ENSMUSG00000037686ENSMUST00000079400ENSMUSG00000054003ENSMUST00000079009ENSMUSG00000091402ENSMUST00000170525ENSMUST00000185354ENSMUST00000189759ENSMUST00000190536ENSMUST00000190680ENSMUSG00000093090ENSMUST00000175349
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X6_0001ENSG00000156414ENST00000339063ENST00000409874ENST00000462273ENST00000466378ENST00000481318ENST00000554571ENST00000557332ENSG00000166183ENST00000546892ENST00000548372ENST00000549809ENST00000550583ENST00000551177ENST00000551871ENSG00000227729ENST00000557640ENSG00000242894ENST00000485467ENSG00000264439ENST00000580575CIL_0006X6_0002ENSMUSG00000037686ENSMUST00000079400ENSMUSG00000054003ENSMUST00000079009ENSMUSG00000091402ENSMUST00000170525ENSMUST00000185354ENSMUST00000189759ENSMUST00000190536ENSMUST00000190680ENSMUSG00000093090ENSMUST00000175349
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156414 ENST00000339063 0.056±0.00 0.172±0.00 N/A 0.324±0.00 N/A 0.064±0.00 0.092±0.00 0.463±0.00 N/A N/A N/A 0.068±0.00 0.267±0.00 9.997±5.41
ENST00000409874 0.183±0.00 N/A 0.165±0.00 0.097±0.01 0.035±0.00 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A 14.910±8.20
ENST00000462273 N/A N/A N/A 0.975±0.53 N/A N/A 0.862±0.00 1.299±0.00 N/A N/A N/A N/A 0.105±0.00 N/A
ENST00000466378 N/A N/A N/A 0.616±0.00 0.983±0.00 0.369±0.24 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481318 N/A N/A N/A 0.804±0.00 N/A 0.098±0.01 0.530±0.30 N/A N/A 0.127±0.00 N/A 0.087±0.00 0.244±0.00 N/A
ENST00000496087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554571 N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A 0.467±0.00 N/A 0.184±0.00 0.705±0.50 N/A N/A
ENST00000557332 N/A N/A N/A 0.039±0.00 N/A N/A 0.114±0.01 N/A 0.030±0.00 0.090±0.00 N/A 0.049±0.00 N/A N/A
ENSG00000166183 ENST00000546892 0.212±0.00 N/A N/A N/A 0.254±0.00 0.212±0.00 4.226±0.00 1.909±0.15 45.247±0.00 2.418±0.00 N/A 3.147±0.25 0.776±0.38 0.734±0.12
ENST00000548372 N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.00
ENST00000549809 N/A N/A N/A N/A 0.376±0.00 N/A N/A N/A N/A N/A N/A 1.238±0.00 N/A N/A
ENST00000550583 0.375±0.00 N/A N/A N/A N/A N/A 5.276±0.00 1.774±0.00 58.343±0.00 N/A N/A 1.965±0.00 N/A N/A
ENST00000551170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551177 N/A 0.089±0.00 N/A 0.032±0.00 0.079±0.00 0.112±0.00 N/A 0.294±0.11 1.873±1.81 0.254±0.19 0.043±0.00 0.736±0.72 0.152±0.01 N/A
ENST00000551871 N/A N/A N/A N/A N/A N/A 0.353±0.00 1.730±0.00 N/A N/A N/A N/A N/A 0.761±0.00
ENST00000552126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227729 ENST00000557640 N/A N/A N/A N/A N/A N/A 3.823±2.83 0.068±0.00 0.086±0.04 N/A N/A N/A 0.116±0.00 0.103±0.00
ENSG00000242894 ENST00000485467 0.132±0.00 N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00
ENSG00000264439 ENST00000580575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.712±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037686 ENSMUST00000079400 4.521±1.45 13.130±5.09 0.034±0.00 0.102±0.07 9.585±4.90 16.578±2.79 1.555±1.20 8.864±1.48 54.351±54.29 1.303±0.23 0.038±0.02 3.190±3.17 2.677±1.72 0.929±0.47
ENSMUSG00000054003 ENSMUST00000079009 0.014±0.01 0.027±0.01 0.027±0.00 0.187±0.00 0.014±0.01 0.030±0.02 0.050±0.01 0.034±0.01 0.020±0.01 0.052±0.02 0.035±0.02 0.262±0.11 0.070±0.06 22.891±7.79
ENSMUSG00000091402 ENSMUST00000170525 N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.048±0.01 N/A 0.085±0.02
ENSMUST00000185354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.02
ENSMUST00000189759 N/A N/A N/A N/A N/A 0.102±0.00 N/A N/A 0.008±0.00 0.027±0.00 N/A N/A N/A 0.031±0.00
ENSMUST00000190536 N/A N/A N/A 0.195±0.00 N/A N/A 0.025±0.00 N/A 0.020±0.00 N/A N/A N/A N/A 0.059±0.00
ENSMUST00000190680 N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A 0.032±0.00 N/A N/A 0.221±0.03 N/A N/A
ENSMUSG00000093090 ENSMUST00000175349 N/A N/A N/A N/A N/A N/A N/A N/A 8525.950±0.00 N/A N/A N/A N/A N/A

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