C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GDP-D-glucose phosphorylase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558017 GDPGP1-002 ENSG00000183208 9606 + 15:90233808-90245811 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonOvaryTestisENST00000558017
Transcript ID Adipose Adrenal Brain Breast Colon Ovary Testis
ENST00000558017 0.877±0.00 1.723±0.00 1.072±0.00 2.189±0.00 1.403±0.00 0.872±0.00 2.216±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0000SV CIL_0000SV_0001 CGP 15:90160604-90234047
CIL_0000SU CIL_0000SU_0001 CGP 15:90229975-90245811
CIL_0003GZ CIL_0003GZ_0001 CGP 15:90233808-90272208

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005737 ISS cytoplasm
GO:0006006 IMP glucose metabolic process
GO:0008152 IEA metabolic process
GO:0016779 IEA nucleotidyltransferase activity
GO:0016787 IEA hydrolase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0080048 IEA:IDA GDP-D-glucose phosphorylase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000062915 Gdpgp1-001 protein_coding Mus_musculus 0 843
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000006 62
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.0003 53
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.0003 53
ENSMUST00000134065 Flt3l-005 retained_intron Mus_musculus 0.00004 55

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