C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000SV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185033-ENSG00000185043 CGP 9606 15:90160604-90234047
GeneTranscriptPositionBiotype
ENSG00000183208 (GDPGP1)
GDP-D-glucose phosphorylase 1 		ENST00000329600 (GDPGP1-201) 90240888-90242080 protein_coding
ENST00000558017 (GDPGP1-002) 90233808-90245811 protein_coding
ENST00000558291 (GDPGP1-005) 90234263-90240939 protein_coding
ENST00000559204 (GDPGP1-001) 90234226-90241550 protein_coding
ENST00000561433 (GDPGP1-004) 90234198-90241057 protein_coding
ENSG00000185033 (SEMA4B)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 		ENST00000332496 (SEMA4B-002) 90184963-90229670 protein_coding
ENST00000411539 (SEMA4B-001) 90201319-90229676 protein_coding
ENST00000558051 (SEMA4B-014) 90201536-90221392 processed_transcript
ENST00000558065 (SEMA4B-004) 90219208-90229679 retained_intron
ENST00000558848 (SEMA4B-012) 90217617-90220218 retained_intron
ENST00000558895 (SEMA4B-007) 90190344-90217554 protein_coding
ENST00000558975 (SEMA4B-015) 90221618-90223792 retained_intron
ENST00000559074 (SEMA4B-005) 90221750-90229660 protein_coding
ENST00000559247 (SEMA4B-019) 90225324-90228407 protein_coding
ENST00000559300 (SEMA4B-011) 90184918-90219843 nonsense_mediated_decay
ENST00000559322 (SEMA4B-006) 90160604-90217786 protein_coding
ENST00000559792 (SEMA4B-009) 90191928-90217810 protein_coding
ENST00000559983 (SEMA4B-017) 90225072-90228155 protein_coding
ENST00000560003 (SEMA4B-013) 90217056-90217785 retained_intron
ENST00000560089 (SEMA4B-003) 90201421-90228747 nonsense_mediated_decay
ENST00000560263 (SEMA4B-008) 90191922-90193563 processed_transcript
ENST00000560993 (SEMA4B-016) 90223877-90225674 retained_intron
ENST00000561085 (SEMA4B-010) 90184920-90221075 protein_coding
ENST00000561252 (SEMA4B-018) 90225002-90225608 retained_intron
ENST00000561321 (SEMA4B-020) 90227239-90228062 retained_intron
ENSG00000185043 (CIB1)
calcium and integrin binding 1 (calmyrin) 		ENST00000328649 (CIB1-001) 90229975-90234047 protein_coding
ENST00000612800 (CIB1-201) 90230246-90234047 protein_coding
ENSG00000225193 (RPS12P26)
ribosomal protein S12 pseudogene 26 		ENST00000492017 (RPS12P26-001) 90206572-90206967 transcribed_processed_pseudogene
ENSG00000240470 (RN7SL346P)
RNA, 7SL, cytoplasmic 346, pseudogene 		ENST00000491561 (RN7SL346P-201) 90166233-90166526 misc_RNA
CIL_0000SV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030539-ENSMUSG00000030538 CGP 10090 7:80186841-80232813
GeneTranscriptPositionBiotype
ENSMUSG00000030538 (Cib1)
calcium and integrin binding 1 (calmyrin) 		ENSMUST00000065163 (Cib1-001) 80227156-80232813 protein_coding
ENSMUST00000071457 (Cib1-002) 80227157-80232619 protein_coding
ENSMUST00000123279 (Cib1-005) 80227994-80232495 protein_coding
ENSMUST00000131402 (Cib1-004) 80228158-80232597 processed_transcript
ENSMUST00000144295 (Cib1-003) 80231451-80232731 retained_intron
ENSMUSG00000030539 (Sema4b)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 		ENSMUST00000032754 (Sema4b-001) 80186841-80226394 protein_coding
ENSMUST00000107383 (Sema4b-002) 80186841-80221832 protein_coding
ENSMUST00000123023 (Sema4b-003) 80198538-80214065 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SV_0001ENSG00000183208ENST00000329600ENST00000558017ENST00000558291ENST00000559204ENST00000561433ENSG00000185033ENST00000332496ENST00000411539ENST00000558051ENST00000558065ENST00000558848ENST00000558895ENST00000558975ENST00000559074ENST00000559247ENST00000559300ENST00000559322ENST00000559792ENST00000559983ENST00000560003ENST00000560089ENST00000560263ENST00000560993ENST00000561085ENST00000561252ENST00000561321ENSG00000185043ENST00000328649ENST00000612800ENSG00000225193ENST00000492017ENSG00000240470ENST00000491561CIL_0000SV_0002ENSMUSG00000030538ENSMUST00000065163ENSMUST00000071457ENSMUST00000123279ENSMUST00000131402ENSMUST00000144295ENSMUSG00000030539ENSMUST00000032754ENSMUST00000107383ENSMUST00000123023
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SV_0001ENSG00000183208ENST00000329600ENST00000558017ENST00000559204ENSG00000185033ENST00000332496ENST00000411539ENST00000558051ENST00000558065ENST00000558895ENST00000559074ENST00000560089ENST00000561085ENST00000561321ENSG00000185043ENST00000328649ENST00000612800ENSG00000225193ENST00000492017ENSG00000240470ENST00000491561CIL_0000SV_0002ENSMUSG00000030538ENSMUST00000065163ENSMUST00000071457ENSMUST00000123279ENSMUST00000131402ENSMUSG00000030539ENSMUST00000032754ENSMUST00000107383
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000183208 ENST00000329600 N/A N/A N/A N/A 1.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558017 0.877±0.00 1.723±0.00 N/A 1.072±0.00 2.189±0.00 1.403±0.00 N/A N/A N/A N/A N/A 0.872±0.00 N/A 2.216±0.00
ENST00000558291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559204 N/A N/A N/A N/A N/A N/A 0.473±0.00 2.026±0.00 0.782±0.00 N/A N/A N/A N/A N/A
ENST00000561433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185033 ENST00000332496 3.682±0.00 8.090±0.00 N/A 5.501±5.34 3.380±2.06 6.728±5.24 4.529±0.00 12.589±11.02 5.579±4.82 23.745±0.00 0.402±0.00 12.012±13.94 14.828±5.02 9.104±0.00
ENST00000411539 0.976±0.00 N/A N/A 0.225±0.00 N/A N/A 1.666±0.00 1.066±0.00 0.736±0.00 N/A N/A 4.049±0.00 5.354±2.93 1.274±0.00
ENST00000558051 N/A N/A 2.381±0.00 1.147±0.00 7.198±0.00 N/A N/A 5.412±0.00 4.298±0.00 N/A N/A 4.800±0.00 N/A N/A
ENST00000558065 N/A N/A 0.332±0.00 N/A N/A 0.360±0.00 N/A N/A N/A 3.414±2.99 N/A N/A N/A 0.913±0.00
ENST00000558848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558895 N/A N/A N/A N/A N/A 7.140±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559074 N/A N/A N/A N/A N/A 5.790±0.00 N/A N/A 4.541±0.00 N/A 0.541±0.00 5.539±0.00 6.437±0.02 4.508±0.00
ENST00000559247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560089 N/A N/A N/A 0.213±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561085 N/A N/A N/A 0.965±0.00 N/A N/A N/A N/A 3.315±0.00 2.154±0.00 N/A N/A N/A N/A
ENST00000561252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.202±0.00 N/A N/A
ENSG00000185043 ENST00000328649 5.009±0.00 6.900±0.00 N/A 2.491±0.33 1.236±0.00 1.473±0.00 4.844±3.97 1.717±0.00 6.923±5.27 10.189±7.69 4.760±1.92 12.636±10.38 16.995±5.80 10.740±0.00
ENST00000612800 29.627±0.00 51.960±0.00 3.063±0.00 21.182±0.00 36.405±0.00 23.199±16.51 26.256±0.00 117.888±0.00 30.851±29.96 108.234±0.00 18.910±0.00 24.402±11.52 40.562±32.26 154.106±103.22
ENSG00000225193 ENST00000492017 0.076±0.00 0.544±0.00 1.848±0.00 0.702±0.15 2.043±1.92 1.020±0.80 0.484±0.41 0.508±0.19 0.134±0.06 0.938±0.75 0.424±0.00 0.790±0.52 0.073±0.00 0.213±0.00
ENSG00000240470 ENST00000491561 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.055±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030538 ENSMUST00000065163 33.545±2.49 50.606±6.21 34.096±6.84 7.007±3.15 36.442±10.13 165.995±9.75 8.054±3.09 109.686±7.61 37.510±6.43 36.046±1.17 2.795±1.12 25.515±9.10 26.859±16.23 101.441±44.49
ENSMUST00000071457 N/A N/A N/A N/A 17.904±0.00 N/A 2.845±0.07 N/A N/A N/A 0.805±0.00 21.146±2.58 32.177±12.98 N/A
ENSMUST00000123279 N/A N/A N/A 20.611±0.00 17.481±0.00 N/A N/A N/A N/A N/A 1.423±0.00 52.345±0.00 150.439±25.04 74.068±46.75
ENSMUST00000131402 21.451±1.62 N/A N/A N/A 20.809±2.14 N/A 3.642±0.89 N/A N/A N/A 1.374±0.23 14.289±1.56 33.291±0.00 N/A
ENSMUST00000144295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030539 ENSMUST00000032754 8.235±1.64 27.546±1.14 7.479±0.23 5.043±1.69 14.121±4.20 30.313±2.02 4.080±0.36 9.461±2.01 2.907±1.83 7.202±0.42 0.476±0.13 22.328±6.75 12.691±11.53 1.700±0.83
ENSMUST00000107383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00
ENSMUST00000123023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading