C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558669 NPM1P43-001 ENSG00000259440 9606 - 15:73161779-73162928 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonMuscleOvaryENST00000558669
Transcript ID Adrenal Bladder Brain Breast Colon Muscle Ovary
ENST00000558669 0.044±0.00 0.487±0.00 0.069±0.03 0.077±0.00 0.240±0.23 0.470±0.00 0.082±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005DF CIL_0005DF_0002 CGP 15:72751369-73305206

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000172394 Gm17060-001 processed_pseudogene Mus_musculus 0 211

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