C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000456615}
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561573 RP11-697E2.6-001 ENSG00000261147 9606 + 15:90249556-90272208 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000561573
Transcript ID Testis
ENST00000561573 16.800±6.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0001 VISTA 15:90100149-90701385
CIL_0003GZ CIL_0003GZ_0001 CGP 15:90233808-90272208
CIL_0003H1 CIL_0003H1_0001 CGP 15:90249556-90278141

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006464 IEA cellular protein modification process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058266 Ttll13-001 protein_coding Mus_musculus 0 540
ENSMUST00000107381 Ttll13-002 retained_intron Mus_musculus 0 464
ENSMUST00000133958 Ttll13-003 retained_intron Mus_musculus 0 388

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