C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058266 Ttll13-001 ENSMUSG00000045467 10090 + 7:80246376-80260821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058266
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058266 0.106±0.03 0.225±0.07 0.171±0.04 0.126±0.04 0.215±0.10 0.128±0.04 0.046±0.00 0.220±0.13 0.102±0.04 0.167±0.05 0.028±0.01 0.436±0.14 0.221±0.21 101.482±23.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AY CIL_0008AY_0002 VISTA 7:80145068-80746500
CIL_0003GZ CIL_0003GZ_0002 CGP 7:80232867-80260821
CIL_0003H1 CIL_0003H1_0002 CGP 7:80246376-80265374

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006464 IEA cellular protein modification process
GO:0008150 ND biological_process
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339615 TTLL13-001 retained_intron Homo_sapiens 0 1687
ENST00000438251 TTLL13-005 unitary_pseudogene Homo_sapiens 0 2220
ENST00000561573 RP11-697E2.6-001 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000617037 TTLL13-002 processed_transcript Homo_sapiens 0 2388
ENST00000621485 TTLL13-004 processed_transcript Homo_sapiens 0 409

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