C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spastic paraplegia 7 (pure and complicated autosomal recessive)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000561702 SPG7-006 ENSG00000197912 9606 + 16:89549846-89557762 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000561702
Transcript ID Muscle
ENST00000561702 3.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HA CIL_0008HA_0001 VISTA 16:89018329-89621235
CIL_000332 CIL_000332_0001 CGP 16:89267627-89557768
CIL_000331 CIL_000331_0001 CGP 16:89490917-89566828

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153285 Spg7-011 protein_coding Mus_musculus 0 708
ENSMUST00000108868 Spg7-201 protein_coding Mus_musculus 0 704
ENSMUST00000128803 Spg7-002 retained_intron Mus_musculus 0 704
ENSMUST00000149248 Spg7-001 protein_coding Mus_musculus 0 704
ENSMUST00000125975 Spg7-003 protein_coding Mus_musculus 0 704
ENSMUST00000128234 Spg7-005 protein_coding Mus_musculus 0 278
ENSMUST00000135991 Spg7-006 protein_coding Mus_musculus 0 215

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