C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 423
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562520 ZNF423-002 ENSG00000102935 9606 - 16:49491275-49857919 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverOvaryTestisENST00000562520
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Ovary Testis
ENST00000562520 0.703±0.00 3.560±0.00 1.176±0.93 2.602±0.00 0.756±0.00 0.044±0.00 0.040±0.00 3.109±2.99 1.583±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VU CIL_0002VU_0001 CGP 16:49373823-49857919
CIL_00080X CIL_00080X_0001 VISTA 16:49401188-50002538
CIL_0002VV CIL_0002VV_0001 CGP 16:49487524-50037088

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007219 ISS Notch signaling pathway
GO:0007399 IEA nervous system development
GO:0030154 IEA cell differentiation
GO:0030513 ISS positive regulation of BMP signaling pathway
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109655 Zfp423-001 protein_coding Mus_musculus 0 5319
ENSMUST00000052250 Zfp423-002 protein_coding Mus_musculus 0 5225
ENSMUST00000165770 Zfp423-003 protein_coding Mus_musculus 0 4892
ENSMUST00000174764 Zfp423-005 protein_coding Mus_musculus 0 1092
ENSMUST00000025288 Zfp521-201 protein_coding Mus_musculus 0 833
ENSMUST00000173725 Zfp423-006 processed_transcript Mus_musculus 0 582
ENSMUST00000173092 Zfp423-007 processed_transcript Mus_musculus 0 553
ENSDART00000083296 ZNF423-201 protein_coding Danio_rerio 0 459
ENSDART00000146133 ZNF423-001 protein_coding Danio_rerio 0 459
ENSMUST00000174249 Zfp423-004 protein_coding Mus_musculus 0 429

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