C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102935-ENSG00000205423 CGP 9606 16:49487524-50037088
GeneTranscriptPositionBiotype
ENSG00000102935 (ZNF423)
zinc finger protein 423 		ENST00000262383 (ZNF423-201) 49490605-49822738 protein_coding
ENST00000535559 (ZNF423-004) 49490787-49664225 protein_coding
ENST00000561648 (ZNF423-001) 49487524-49827010 protein_coding
ENST00000562520 (ZNF423-002) 49491275-49857919 protein_coding
ENST00000562871 (ZNF423-005) 49490605-49780609 protein_coding
ENST00000563137 (ZNF423-003) 49490604-49856135 protein_coding
ENST00000567169 (ZNF423-008) 49490951-49640852 protein_coding
ENST00000568094 (ZNF423-006) 49730576-49789546 protein_coding
ENSG00000259978 (MRPS21P8)
mitochondrial ribosomal protein S21 pseudogene 8 		ENST00000569196 (MRPS21P8-001) 49764454-49764688 processed_pseudogene
ENSG00000260089 (ADAM3B)
ADAM metallopeptidase domain 3B (pseudogene) 		ENST00000569937 (ADAM3B-001) 49517762-49518601 processed_pseudogene
ENSG00000261751 (RP11-305A4.3)
 ENST00000563124 (RP11-305A4.3-001) 49920730-49924154 lincRNA
ENSG00000265708 (AC027348.1)
 ENST00000578350 (AC027348.1-201) 49816685-49816784 miRNA
ENSG00000275155 (CTD-2595P9.4)
 ENST00000615979 (CTD-2595P9.4-001) 49847018-49847632 sense_intronic
ENSG00000276695 (AC007339.2)
 ENST00000620982 (AC007339.2-201) 49680190-49680274 miRNA
ENSG00000280131 (CTD-2595P9.2)
 ENST00000624375 (CTD-2595P9.2-001) 49711273-49711914 TEC
CIL_0002VV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045333-ENSMUSG00000036810 CGP 10090 8:87661810-88135110
GeneTranscriptPositionBiotype
ENSMUSG00000036810 (Cnep1r1)
CTD nuclear envelope phosphatase 1 regulatory subunit 1 		ENSMUST00000095214 (Cnep1r1-001) 88118769-88135106 protein_coding
ENSMUST00000117775 (Cnep1r1-005) 88118807-88131070 protein_coding
ENSMUST00000121097 (Cnep1r1-003) 88118800-88131687 protein_coding
ENSMUST00000127490 (Cnep1r1-002) 88118787-88135110 nonsense_mediated_decay
ENSMUST00000128290 (Cnep1r1-004) 88118800-88134480 retained_intron
ENSMUST00000131891 (Cnep1r1-006) 88118778-88130854 processed_transcript
ENSMUSG00000045333 (Zfp423)
zinc finger protein 423 		ENSMUST00000052250 (Zfp423-002) 87661812-87895735 protein_coding
ENSMUST00000109655 (Zfp423-001) 87661810-87959595 protein_coding
ENSMUST00000165770 (Zfp423-003) 87661810-87804439 protein_coding
ENSMUST00000173092 (Zfp423-007) 87783333-87948731 processed_transcript
ENSMUST00000173725 (Zfp423-006) 87783316-87944052 processed_transcript
ENSMUST00000174249 (Zfp423-004) 87783147-87803823 protein_coding
ENSMUST00000174764 (Zfp423-005) 87782992-87953862 protein_coding
ENSMUSG00000097631 (Gm2716)
predicted gene 2716 		ENSMUST00000181500 (Gm2716-201) 88044898-88118607 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VV_0001ENSG00000102935ENST00000262383ENST00000535559ENST00000561648ENST00000562520ENST00000562871ENST00000563137ENST00000567169ENST00000568094ENSG00000259978ENST00000569196ENSG00000260089ENST00000569937ENSG00000261751ENST00000563124ENSG00000265708ENST00000578350ENSG00000275155ENST00000615979ENSG00000276695ENST00000620982ENSG00000280131ENST00000624375CIL_0002VV_0002ENSMUSG00000036810ENSMUST00000095214ENSMUST00000117775ENSMUST00000121097ENSMUST00000127490ENSMUST00000128290ENSMUST00000131891ENSMUSG00000045333ENSMUST00000052250ENSMUST00000109655ENSMUST00000165770ENSMUST00000173092ENSMUST00000173725ENSMUST00000174249ENSMUST00000174764ENSMUSG00000097631ENSMUST00000181500
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VV_0001ENSG00000102935ENST00000262383ENST00000535559ENST00000561648ENST00000562520ENST00000562871ENST00000563137ENST00000567169ENST00000568094ENSG00000259978ENST00000569196ENSG00000260089ENST00000569937ENSG00000261751ENST00000563124ENSG00000265708ENST00000578350ENSG00000275155ENST00000615979ENSG00000276695ENST00000620982ENSG00000280131ENST00000624375CIL_0002VV_0002ENSMUSG00000036810ENSMUST00000095214ENSMUST00000121097ENSMUST00000127490ENSMUST00000128290ENSMUST00000131891ENSMUSG00000045333ENSMUST00000052250ENSMUST00000109655ENSMUST00000165770ENSMUST00000173092ENSMUST00000174764ENSMUSG00000097631ENSMUST00000181500
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102935 ENST00000262383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A 0.366±0.00 0.869±0.33 0.646±0.00
ENST00000535559 0.579±0.00 N/A 0.414±0.00 0.901±0.11 1.237±0.10 0.315±0.00 0.266±0.00 0.249±0.12 0.994±0.00 N/A N/A 2.843±2.76 0.775±0.13 2.755±0.00
ENST00000561648 N/A N/A N/A N/A 0.158±0.00 0.055±0.00 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A
ENST00000562520 0.703±0.00 3.560±0.00 N/A 1.176±0.93 2.602±0.00 0.756±0.00 0.044±0.00 N/A 0.040±0.00 N/A N/A 3.109±2.99 N/A 1.583±0.00
ENST00000562871 N/A N/A N/A 0.453±0.00 N/A N/A N/A N/A 0.118±0.00 N/A 0.747±0.00 1.078±0.00 0.871±0.02 N/A
ENST00000563137 1.436±0.00 1.681±0.00 N/A 1.624±0.00 1.112±0.00 0.995±0.48 0.339±0.28 0.338±0.15 1.029±0.00 0.921±0.00 2.196±1.42 4.010±0.00 0.673±0.00 0.888±0.33
ENST00000567169 2.606±0.00 6.385±0.00 N/A 2.314±0.00 4.409±0.00 2.299±0.00 1.150±0.00 N/A 0.042±0.00 1.138±0.87 2.943±0.00 1.681±1.74 0.757±0.00 3.157±1.97
ENST00000568094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.592±0.00
ENSG00000259978 ENST00000569196 N/A N/A N/A N/A N/A 1.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260089 ENST00000569937 N/A N/A N/A 0.034±0.00 0.076±0.04 0.010±0.00 0.200±0.00 N/A 0.131±0.00 0.182±0.00 0.161±0.00 0.045±0.01 N/A 0.080±0.02
ENSG00000261751 ENST00000563124 0.108±0.00 0.152±0.00 N/A 0.056±0.00 0.041±0.00 N/A 0.108±0.00 0.079±0.00 0.034±0.00 0.018±0.00 0.008±0.00 0.024±0.00 N/A 0.281±0.05
ENSG00000265708 ENST00000578350 0.932±0.00 N/A N/A 1.033±0.00 1.236±0.00 N/A N/A N/A N/A 0.485±0.00 N/A 20.584±0.00 N/A N/A
ENSG00000275155 ENST00000615979 0.232±0.00 1.288±0.00 N/A 0.113±0.00 0.946±0.00 0.197±0.01 0.190±0.05 0.151±0.00 0.440±0.00 0.758±0.00 0.429±0.00 1.259±0.80 0.102±0.01 0.609±0.29
ENSG00000276695 ENST00000620982 1.102±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280131 ENST00000624375 N/A 0.098±0.00 N/A 0.047±0.00 0.015±0.00 0.053±0.00 0.015±0.00 0.096±0.00 0.041±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036810 ENSMUST00000095214 12.121±3.59 9.119±1.19 16.947±3.00 12.235±5.86 9.025±2.14 8.594±1.38 8.003±0.52 12.731±1.13 12.343±3.95 13.802±1.38 11.864±1.38 7.811±4.57 13.170±6.20 9.232±4.37
ENSMUST00000117775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121097 2.758±0.04 1.064±0.41 2.665±0.31 3.626±0.10 1.190±0.11 1.231±0.26 N/A 1.638±0.16 1.950±0.99 1.819±0.26 N/A 1.929±1.01 2.710±0.54 1.572±0.20
ENSMUST00000127490 N/A 3.664±0.00 N/A N/A 3.000±0.46 2.135±0.00 4.834±0.83 N/A N/A 2.722±0.00 4.302±0.97 3.627±1.07 1.576±0.00 N/A
ENSMUST00000128290 2.929±0.32 1.241±0.29 N/A N/A 2.600±0.00 2.046±0.00 N/A N/A 1.288±0.00 N/A N/A 1.703±0.68 N/A 0.641±0.00
ENSMUST00000131891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.270±0.00 8.486±0.57 N/A
ENSMUSG00000045333 ENSMUST00000052250 8.339±0.00 1.190±0.03 N/A 19.283±0.00 1.442±0.00 0.351±0.00 0.798±0.00 0.520±0.00 0.223±0.19 1.567±0.75 N/A 4.130±1.94 0.147±0.00 0.808±0.00
ENSMUST00000109655 2.230±0.42 1.892±0.58 1.049±0.03 3.727±2.36 2.074±0.59 0.234±0.00 0.293±0.07 0.320±0.11 0.074±0.03 0.426±0.06 0.870±0.23 2.291±0.78 0.651±0.28 N/A
ENSMUST00000165770 4.588±0.11 2.797±1.74 2.770±0.04 2.395±1.50 2.432±0.47 1.586±0.30 0.988±0.51 0.906±0.25 0.142±0.05 1.033±0.52 0.501±0.10 5.083±2.56 0.271±0.13 1.015±0.57
ENSMUST00000173092 N/A N/A N/A 10.812±0.00 N/A N/A N/A N/A N/A N/A N/A 10.797±0.00 4.860±0.00 5.460±0.00
ENSMUST00000173725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174764 N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097631 ENSMUST00000181500 N/A N/A N/A 0.036±0.02 N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.129±0.00 0.008±0.00 2.185±1.18

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