C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ERI1 exoribonuclease family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563117 ERI2-003 ENSG00000196678 9606 - 16:20797374-20806676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000563117
Transcript ID Colon
ENST00000563117 3.617±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003N2 CIL_0003N2_0001 CGP 16:20780193-20900349

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0008270 IEA zinc ion binding
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150844 Eri2-001 protein_coding Mus_musculus 0 1635
ENSMUST00000033224 Eri2-002 nonsense_mediated_decay Mus_musculus 0 1615
ENSMUST00000139192 Eri2-007 nonsense_mediated_decay Mus_musculus 0 929
ENSMUST00000125595 Eri2-003 retained_intron Mus_musculus 0 928
ENSMUST00000063902 Eri2-004 protein_coding Mus_musculus 0 824
ENSMUST00000106523 Eri2-005 protein_coding Mus_musculus 0 821
ENSMUST00000133926 Eri2-006 retained_intron Mus_musculus 3e-37 161

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