C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ceroid-lipofuscinosis, neuronal 6, late infantile, variant
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564752 CLN6-006 ENSG00000128973 9606 - 15:68208327-68229709 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034776 Cln6-001 protein_coding Mus_musculus 0 715
ENSMUST00000138276 Cln6-003 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000141821 Cln6-002 nonsense_mediated_decay Mus_musculus 0 211
ENSMUST00000124984 Cln6-004 protein_coding Mus_musculus 3e-33 147
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 4e-31 139
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 4e-31 139

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