C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000566277 CTD-2033A16.2-001 ENSG00000260290 9606 - 16:69756536-69757937 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000566277
Transcript ID Adipose Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000566277 0.011±0.00 0.013±0.00 0.026±0.00 0.023±0.00 0.077±0.00 0.034±0.00 0.011±0.00 0.075±0.06 0.041±0.00 0.049±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0001 VISTA 16:69347064-69947578
CIL_0001NB CIL_0001NB_0001 CGP 16:69741867-69941741

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033673 Nono-001 protein_coding Mus_musculus 0 1759
ENSMUST00000120076 Gm8806-001 processed_pseudogene Mus_musculus 0 1731
ENSMUST00000126019 Nono-002 retained_intron Mus_musculus 0 773
ENSMUST00000136251 Nono-005 retained_intron Mus_musculus 0 484
ENSMUST00000147498 Nono-004 retained_intron Mus_musculus 0 479
ENSMUST00000148312 Nono-006 processed_transcript Mus_musculus 0 344
ENSMUST00000134783 Nono-007 retained_intron Mus_musculus 0 322
ENSMUST00000119279 Gm11366-001 processed_pseudogene Mus_musculus 0 233

Loading