C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ceroid-lipofuscinosis, neuronal 6, late infantile, variant | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000567060  |
CLN6-003 |
ENSG00000128973 |
9606 | - |
15:68207933-68229670  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0043231 | IDA | intracellular membrane-bounded organelle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034776
|
Cln6-001 | protein_coding | Mus_musculus | 0 | 424 |
|
ENSMUST00000124984
|
Cln6-004 | protein_coding | Mus_musculus | 0 | 355 |
|
ENSMUST00000156423
|
Gm10653-003 | processed_transcript | Mus_musculus | 0 | 254 |
|
ENSMUST00000132250
|
Gm10653-002 | processed_transcript | Mus_musculus | 0 | 254 |
|
ENSMUST00000138276
|
Cln6-003 | nonsense_mediated_decay | Mus_musculus | 0 | 230 |
|
ENSMUST00000141821
|
Cln6-002 | nonsense_mediated_decay | Mus_musculus | 0 | 211 |
