C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pyridoxal-dependent decarboxylase domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000569715 PDXDC1-004 ENSG00000179889 9606 + 16:14975123-15037687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000569715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000569715 16.189±0.00 10.874±0.00 10.880±0.00 9.668±3.63 12.017±2.80 19.254±4.61 7.005±4.74 21.456±8.97 17.387±11.81 11.311±4.70 6.436±4.20 14.310±5.74 25.803±5.22 70.372±22.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0016831 IEA carboxy-lyase activity
GO:0019752 IEA carboxylic acid metabolic process
GO:0030170 IEA pyridoxal phosphate binding
GO:0043231 IDA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154150 Pdxdc1-003 retained_intron Mus_musculus 0 2296
ENSMUST00000023361 Pdxdc1-001 protein_coding Mus_musculus 0 2189
ENSMUST00000115804 Pdxdc1-010 protein_coding Mus_musculus 0 2034
ENSMUST00000115802 Pdxdc1-002 protein_coding Mus_musculus 0 1120
ENSMUST00000115803 Pdxdc1-004 protein_coding Mus_musculus 0 676
ENSMUST00000139859 Pdxdc1-014 retained_intron Mus_musculus 0 525
ENSMUST00000151774 Pdxdc1-012 processed_transcript Mus_musculus 0 436
ENSMUST00000148551 Pdxdc1-013 processed_transcript Mus_musculus 0 222
ENSMUST00000137715 Pdxdc1-011 retained_intron Mus_musculus 2e-35 156

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