C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphate cytidylyltransferase 2, ethanolamine
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000570391 PCYT2-007 ENSG00000185813 9606 - 17:81904424-81911267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000570391
Transcript ID Brain Testis
ENST00000570391 5.626±0.00 126.371±68.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991
CIL_0004M4 CIL_0004M4_0001 CGP 17:81890790-81902905
CIL_0004M5 CIL_0004M5_0001 CGP 17:81900745-81911464
CIL_0004LV CIL_0004LV_0001 CGP 17:81900965-81921323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004306 TAS ethanolamine-phosphate cytidylyltransferase activity
GO:0005575 ND cellular_component
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006646 IEA phosphatidylethanolamine biosynthetic process
GO:0008654 TAS phospholipid biosynthetic process
GO:0009058 IEA biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106188 Pcyt2-002 protein_coding Mus_musculus 0 1277
ENSMUST00000026129 Pcyt2-001 protein_coding Mus_musculus 0 673
ENSMUST00000106187 Pcyt2-005 retained_intron Mus_musculus 0 608
ENSDART00000063135 pcyt2-001 protein_coding Danio_rerio 0 503
ENSMUST00000126723 Pcyt2-011 processed_transcript Mus_musculus 0 433
ENSMUST00000124504 Pcyt2-008 retained_intron Mus_musculus 0 387
ENSMUST00000145356 Pcyt2-004 retained_intron Mus_musculus 0 276
ENSMUST00000143502 Pcyt2-009 retained_intron Mus_musculus 0 239
ENSDART00000140987 pcyt2-003 retained_intron Danio_rerio 0 207
ENSMUST00000134671 Pcyt2-007 retained_intron Mus_musculus 0 200
ENSMUST00000124468 Pcyt2-006 retained_intron Mus_musculus 1e-34 152
ENSDART00000140729 pcyt2-002 retained_intron Danio_rerio 0.0000000000006 81

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