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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000571806  |
TSR1-004 |
ENSG00000167721 |
9606 | - |
17:2334785-2336657  |
nonsense_mediated_decay |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00093G | CIL_00093G_0001 | VISTA | 17:1876478-2477942 |
| CIL_0007RP | CIL_0007RP_0001 | VISTA | 17:1878704-2480995 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000155702
|
Tsr1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 547 |
|
ENSMUST00000155785
|
Tsr1-003 | retained_intron | Mus_musculus | 4e-21 | 106 |
|
ENSMUST00000045807
|
Tsr1-001 | protein_coding | Mus_musculus | 4e-21 | 106 |
|
ENSMUST00000128230
|
Tsr1-006 | nonsense_mediated_decay | Mus_musculus | 1e-20 | 104 |
