C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PITPNM family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572795 PITPNM3-003 ENSG00000091622 9606 - 17:6455400-6481829 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonENST00000572795
Transcript ID Breast Colon
ENST00000572795 0.092±0.00 0.549±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RM CIL_0000RM_0001 CGP 17:6393693-6451469
CIL_00007K CIL_00007K_0001 CGP 17:6444415-6556494
CIL_0006SQ CIL_0006SQ_0002 CGP 17:6451264-6640927

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108508 Pitpnm3-005 protein_coding Mus_musculus 0 2902
ENSMUST00000075258 Pitpnm3-001 protein_coding Mus_musculus 0 2902
ENSMUST00000142471 Pitpnm3-004 retained_intron Mus_musculus 0 643
ENSMUST00000132781 Pitpnm3-003 retained_intron Mus_musculus 0 593
ENSMUST00000134210 Pitpnm3-002 processed_transcript Mus_musculus 0 532
ENSMUST00000033846 Angpt2-001 protein_coding Mus_musculus 0.0002 53

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