C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: phosphate cytidylyltransferase 2, ethanolamine
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000573401 PCYT2-004 ENSG00000185813 9606 - 17:81906100-81911377 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000573401
Transcript ID Liver
ENST00000573401 3.546±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M3 CIL_0004M3_0001 CGP 17:81887844-81900991
CIL_0004M4 CIL_0004M4_0001 CGP 17:81890790-81902905
CIL_0004M5 CIL_0004M5_0001 CGP 17:81900745-81911464
CIL_0004LV CIL_0004LV_0001 CGP 17:81900965-81921323

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026129 Pcyt2-001 protein_coding Mus_musculus 0 1051
ENSMUST00000106187 Pcyt2-005 retained_intron Mus_musculus 0 680
ENSMUST00000106188 Pcyt2-002 protein_coding Mus_musculus 0 608
ENSMUST00000126723 Pcyt2-011 processed_transcript Mus_musculus 0 433
ENSMUST00000145356 Pcyt2-004 retained_intron Mus_musculus 0 276
ENSDART00000063135 pcyt2-001 protein_coding Danio_rerio 0 263
ENSMUST00000134671 Pcyt2-007 retained_intron Mus_musculus 0 252
ENSMUST00000124468 Pcyt2-006 retained_intron Mus_musculus 0 224
ENSDART00000140987 pcyt2-003 retained_intron Danio_rerio 0 207
ENSDART00000140729 pcyt2-002 retained_intron Danio_rerio 0.0000000000003 81

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