C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, light chain 12A, regulatory, non-sarcomeric
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579226 MYL12A-002 ENSG00000101608 9606 + 18:3247481-3256227 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungTestisENST00000579226
Transcript ID Brain Colon Liver Lung Testis
ENST00000579226 6.342±0.00 23.453±0.00 14.829±0.00 68.174±0.00 17.287±4.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025P CIL_00025P_0002 CGP 18:3066807-3256236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024846 Myl12a-006 protein_coding Mus_musculus 0 645
ENSMUST00000148960 Myl12a-001 protein_coding Mus_musculus 0 645
ENSMUST00000038446 Myl12b-001 protein_coding Mus_musculus 0 582
ENSMUST00000123686 Myl12a-003 protein_coding Mus_musculus 0 568
ENSMUST00000121056 Gm6517-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000126529 Myl12a-002 retained_intron Mus_musculus 0 442
ENSMUST00000137537 Myl12b-003 retained_intron Mus_musculus 0 385
ENSMUST00000150456 Myl12a-004 protein_coding Mus_musculus 0 344

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