C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin D binding myb-like transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000579677 DMTF1-029 ENSG00000135164 9606 + 7:87152412-87196325 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungMuscleOvaryENST00000579677
Transcript ID Bladder Colon Lung Muscle Ovary
ENST00000579677 2.114±0.00 2.015±0.74 3.180±0.00 1.154±0.00 4.312±1.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184888 Dmtf1-012 nonsense_mediated_decay Mus_musculus 0 3655
ENSMUST00000184401 Dmtf1-015 nonsense_mediated_decay Mus_musculus 0 3426
ENSMUST00000184120 Dmtf1-011 nonsense_mediated_decay Mus_musculus 0 2407
ENSMUST00000071921 Dmtf1-001 protein_coding Mus_musculus 0 2180
ENSMUST00000183973 Dmtf1-009 protein_coding Mus_musculus 0 2178
ENSMUST00000183448 Dmtf1-010 nonsense_mediated_decay Mus_musculus 0 2078
ENSMUST00000184620 Dmtf1-013 nonsense_mediated_decay Mus_musculus 0 1463
ENSMUST00000184159 Dmtf1-008 nonsense_mediated_decay Mus_musculus 0 1299
ENSMUST00000095017 Dmtf1-002 protein_coding Mus_musculus 0 1247
ENSMUST00000184903 Dmtf1-004 processed_transcript Mus_musculus 0 1238
ENSMUST00000184947 Dmtf1-005 retained_intron Mus_musculus 0 1190
ENSMUST00000184372 Dmtf1-017 protein_coding Mus_musculus 0 994
ENSMUST00000183525 Dmtf1-014 protein_coding Mus_musculus 0 854
ENSMUST00000183792 Dmtf1-006 retained_intron Mus_musculus 0 641
ENSMUST00000185193 Dmtf1-003 retained_intron Mus_musculus 0 553
ENSMUST00000081074 4932411N23Rik-001 protein_coding Mus_musculus 0 488
ENSMUST00000183347 Dmtf1-019 retained_intron Mus_musculus 0 357
ENSMUST00000184370 Dmtf1-018 nonsense_mediated_decay Mus_musculus 0 244
ENSMUST00000185100 Dmtf1-016 protein_coding Mus_musculus 3e-33 148
ENSMUST00000115365 Tmem243-201 protein_coding Mus_musculus 7e-25 121

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