C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SNRPN upstream reading frame
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580062 SNURF-006 ENSG00000273173 9606 + 15:24955004-24977850 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000580062
Transcript ID Colon
ENST00000580062 20.434±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 NAS nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098402 Snrpn-202 protein_coding Mus_musculus 0 664
ENSMUST00000059305 Snrpn-201 protein_coding Mus_musculus 0 664
ENSMUST00000120366 Gm14881-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000179360 Snrpn-002 nonsense_mediated_decay Mus_musculus 0 289

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