C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | chromosome 17 open reading frame 62 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000585080  |
C17orf62-015 |
ENSG00000178927 |
9606 | - |
17:82443997-82450775  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00054N | CIL_00054N_0001 | CGP | 17:82389223-82442645 |
| CIL_00054K | CIL_00054K_0001 | CGP | 17:82418318-82450829 |
| CIL_00043T | CIL_00043T_0002 | CGP | 17:82442589-82490537 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000038709
|
BC017643-001 | protein_coding | Mus_musculus | 0 | 643 |
|
ENSMUST00000106115
|
BC017643-003 | protein_coding | Mus_musculus | 0 | 643 |
|
ENSMUST00000137299
|
BC017643-004 | protein_coding | Mus_musculus | 0 | 532 |
|
ENSMUST00000149351
|
BC017643-006 | retained_intron | Mus_musculus | 0 | 521 |
|
ENSMUST00000147490
|
BC017643-002 | protein_coding | Mus_musculus | 0 | 459 |
|
ENSMUST00000133535
|
BC017643-007 | retained_intron | Mus_musculus | 0 | 370 |
|
ENSMUST00000169393
|
BC017643-008 | protein_coding | Mus_musculus | 0 | 222 |
|
ENSMUST00000156214
|
BC017643-005 | nonsense_mediated_decay | Mus_musculus | 3e-27 | 126 |
