C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: WD repeat domain 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587391 WDR62-003 ENSG00000075702 9606 + 19:36054963-36105106 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaENST00000587391
Transcript ID Brain Liver Ovary Placenta
ENST00000587391 0.266±0.00 0.021±0.00 1.001±0.00 0.071±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 IDA spindle pole
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0021987 IMP cerebral cortex development
GO:0022008 IMP neurogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134570 Wdr62-003 protein_coding Mus_musculus 0 1825
ENSMUST00000108190 Wdr62-001 protein_coding Mus_musculus 0 1709
ENSMUST00000145027 Wdr62-002 nonsense_mediated_decay Mus_musculus 0 1709
ENSMUST00000132483 Wdr62-005 retained_intron Mus_musculus 0 706
ENSMUST00000152543 Wdr62-007 processed_transcript Mus_musculus 0 278
ENSMUST00000014072 Thap8-201 protein_coding Mus_musculus 4e-39 169
ENSMUST00000108187 Thap8-001 protein_coding Mus_musculus 4e-39 169
ENSMUST00000179332 5730455P16Rik-201 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000103225 5730455P16Rik-001 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000004 69
ENSMUST00000024742 Nfkbie-201 protein_coding Mus_musculus 0.0000007 62

Loading