C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 404
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587539 ZNF404-001 ENSG00000176222 9606 - 19:43872363-43883964 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartOvaryPlacentaTestisENST00000587539
Transcript ID Heart Ovary Placenta Testis
ENST00000587539 1.483±0.00 0.913±0.78 0.324±0.00 0.795±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 7e-32 143
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 7e-32 143
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 7e-32 143
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 2e-18 99
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 7e-17 94
ENSMUST00000182248 Zfp566-002 retained_intron Mus_musculus 7e-17 94
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 7e-17 94
ENSMUST00000109128 Zfp2-001 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000116378 Zfp2-002 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000109129 Zfp2-005 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 0.0000000000006 81
ENSMUST00000077787 Zfp14-201 protein_coding Mus_musculus 0.00000000009 73
ENSMUST00000137573 Zfp866-001 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000034259 Zfp709-201 protein_coding Mus_musculus 0.000009 57
ENSMUST00000188685 Zfp709-001 protein_coding Mus_musculus 0.000009 57

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