C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: haloacid dehalogenase-like hydrolase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588183 HDHD2-001 ENSG00000167220 9606 - 18:47107408-47150500 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryPlacentaTestisENST00000588183
Transcript ID Brain Lung Ovary Placenta Testis
ENST00000588183 4.367±2.73 3.295±0.00 4.863±0.00 2.625±0.00 5.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0001 VISTA 18:46943900-47544913
CIL_0000B0 CIL_0000B0_0002 CGP 18:47107403-47176281

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026485 Hdhd2-201 protein_coding Mus_musculus 0 889
ENSMUST00000097522 Hdhd2-203 protein_coding Mus_musculus 0 889
ENSMUST00000150990 Hdhd2-005 protein_coding Mus_musculus 0 889
ENSMUST00000148955 Hdhd2-003 protein_coding Mus_musculus 0 889
ENSMUST00000142456 Hdhd2-007 nonsense_mediated_decay Mus_musculus 0 706
ENSMUST00000145634 Hdhd2-001 protein_coding Mus_musculus 0 706
ENSMUST00000097521 Hdhd2-202 protein_coding Mus_musculus 0 254
ENSMUST00000147332 Hdhd2-002 protein_coding Mus_musculus 0 254
ENSMUST00000143910 Hdhd2-006 protein_coding Mus_musculus 0 213
ENSMUST00000156454 Hdhd2-004 protein_coding Mus_musculus 8.00001e-42 176

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