C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008DZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs375 VISTA 9606 18:46943900-47544913
GeneTranscriptPositionBiotype
ENSG00000134049 (IER3IP1)
immediate early response 3 interacting protein 1 		ENST00000256433 (IER3IP1-001) 47152998-47176374 protein_coding
ENSG00000167216 (KATNAL2)
katanin p60 subunit A-like 2 		ENST00000245121 (KATNAL2-001) 46946824-47102243 protein_coding
ENST00000356157 (KATNAL2-010) 46946855-47101005 protein_coding
ENST00000585383 (KATNAL2-005) 47052893-47054601 retained_intron
ENST00000585469 (KATNAL2-009) 46946797-47063361 protein_coding
ENST00000586198 (KATNAL2-007) 47069223-47077542 protein_coding
ENST00000588433 (KATNAL2-006) 47058234-47100335 protein_coding
ENST00000591522 (KATNAL2-002) 47069586-47098948 protein_coding
ENST00000592005 (KATNAL2-008) 46917492-47098482 protein_coding
ENSG00000167220 (HDHD2)
haloacid dehalogenase-like hydrolase domain containing 2 		ENST00000300605 (HDHD2-002) 47107403-47150520 protein_coding
ENST00000586546 (HDHD2-005) 47115316-47150493 nonsense_mediated_decay
ENST00000587388 (HDHD2-003) 47130244-47150476 protein_coding
ENST00000587841 (HDHD2-012) 47108378-47150476 processed_transcript
ENST00000588183 (HDHD2-001) 47107408-47150500 nonsense_mediated_decay
ENST00000588861 (HDHD2-014) 47107628-47110856 retained_intron
ENST00000588940 (HDHD2-007) 47130243-47150201 protein_coding
ENST00000590481 (HDHD2-013) 47130242-47150479 protein_coding
ENST00000590815 (HDHD2-006) 47115131-47150459 protein_coding
ENST00000591268 (HDHD2-009) 47130244-47150195 nonsense_mediated_decay
ENST00000591480 (HDHD2-010) 47115279-47150498 protein_coding
ENST00000591671 (HDHD2-011) 47134419-47150500 processed_transcript
ENST00000592591 (HDHD2-004) 47130246-47150498 protein_coding
ENSG00000183791 (TCEB3C)
transcription elongation factor B polypeptide 3C (elongin A3) 		ENST00000330682 (TCEB3C-001) 47028202-47030078 protein_coding
ENSG00000206181 (TCEB3B)
transcription elongation factor B polypeptide 3B (elongin A2) 		ENST00000332567 (TCEB3B-001) 47032572-47035621 protein_coding
ENST00000620522 (TCEB3B-201) 47033003-47035264 protein_coding
ENSG00000215474 (SKOR2)
SKI family transcriptional corepressor 2 		ENST00000400404 (SKOR2-001) 47231123-47249183 protein_coding
ENST00000425639 (SKOR2-002) 47219922-47249183 protein_coding
ENST00000620245 (SKOR2-201) 47212089-47249183 protein_coding
ENSG00000267228 (IER3IP1)
immediate early response 3 interacting protein 1 		ENST00000588705 (IER3IP1-001) 47134656-47176281 nonsense_mediated_decay
ENST00000602459 (IER3IP1-003) 47134656-47176280 nonsense_mediated_decay
ENST00000602926 (IER3IP1-002) 47134656-47176280 nonsense_mediated_decay
ENSG00000267724 (RP11-49K24.8)
 ENST00000591183 (RP11-49K24.8-001) 47105946-47108062 antisense
ENSG00000275553 (TCEB3CL)
transcription elongation factor B polypeptide 3C-like 		ENST00000614938 (TCEB3CL-201) 46968695-47029842 protein_coding
ENST00000620688 (TCEB3CL-001) 46968695-46969609 protein_coding
ENSG00000278674 (RP11-49K24.9)
 ENST00000611323 (RP11-49K24.9-001) 47022287-47023927 protein_coding
ENSG00000279367 (RP11-157P23.1)
 ENST00000625076 (RP11-157P23.1-001) 47501172-47503106 TEC
ENSG00000280212 (RP11-49K24.3)
 ENST00000623573 (RP11-49K24.3-001) 47076117-47076594 TEC
CIL_0008DZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs375 VISTA 10090 18:76562703-77163723
GeneTranscriptPositionBiotype
ENSMUSG00000025420 (Katnal2)
katanin p60 subunit A-like 2 		ENSMUST00000026486 (Katnal2-005) 76993199-77047296 protein_coding
ENSMUST00000122984 (Katnal2-003) 76977149-77047286 nonsense_mediated_decay
ENSMUST00000123650 (Katnal2-007) 77010533-77047298 protein_coding
ENSMUST00000125744 (Katnal2-010) 77001693-77012031 processed_transcript
ENSMUST00000126153 (Katnal2-001) 76977148-77047308 protein_coding
ENSMUST00000135029 (Katnal2-002) 76977149-77047243 nonsense_mediated_decay
ENSMUST00000137354 (Katnal2-008) 76977157-77047243 protein_coding
ENSMUST00000137498 (Katnal2-004) 76977151-77047270 protein_coding
ENSMUST00000138336 (Katnal2-009) 77002541-77008202 retained_intron
ENSMUST00000154053 (Katnal2-011) 76978461-77006872 processed_transcript
ENSMUST00000154665 (Katnal2-006) 77010041-77047287 protein_coding
ENSMUSG00000025423 (Pias2)
protein inhibitor of activated STAT 2 		ENSMUST00000114776 (Pias2-201) 77065680-77146939 protein_coding
ENSMUST00000114777 (Pias2-202) 77065208-77155708 protein_coding
ENSMUST00000168882 (Pias2-203) 77065680-77155708 protein_coding
ENSMUSG00000090000 (Ier3ip1)
immediate early response 3 interacting protein 1 		ENSMUST00000026487 (Ier3ip1-001) 76930017-76941605 protein_coding
ENSMUST00000128679 (Ier3ip1-003) 76930063-76939748 retained_intron
ENSMUST00000136800 (Ier3ip1-002) 76930045-76941605 processed_transcript
ENSMUST00000152369 (Ier3ip1-004) 76939284-76940689 retained_intron
ENSMUSG00000091519 (Skor2)
SKI family transcriptional corepressor 2 		ENSMUST00000166956 (Skor2-201) 76856405-76900342 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DZ_0001ENSG00000134049ENST00000256433ENSG00000167216ENST00000245121ENST00000356157ENST00000585383ENST00000585469ENST00000586198ENST00000588433ENST00000591522ENST00000592005ENSG00000167220ENST00000300605ENST00000586546ENST00000587388ENST00000587841ENST00000588183ENST00000588861ENST00000588940ENST00000590481ENST00000590815ENST00000591268ENST00000591480ENST00000591671ENST00000592591ENSG00000183791ENST00000330682ENSG00000206181ENST00000332567ENST00000620522ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267228ENST00000588705ENST00000602459ENST00000602926ENSG00000267724ENST00000591183ENSG00000275553ENST00000614938ENST00000620688ENSG00000278674ENST00000611323ENSG00000279367ENST00000625076ENSG00000280212ENST00000623573CIL_0008DZ_0002ENSMUSG00000025420ENSMUST00000026486ENSMUST00000122984ENSMUST00000123650ENSMUST00000125744ENSMUST00000126153ENSMUST00000135029ENSMUST00000137354ENSMUST00000137498ENSMUST00000138336ENSMUST00000154053ENSMUST00000154665ENSMUSG00000025423ENSMUST00000114776ENSMUST00000114777ENSMUST00000168882ENSMUSG00000090000ENSMUST00000026487ENSMUST00000128679ENSMUST00000136800ENSMUST00000152369ENSMUSG00000091519ENSMUST00000166956
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DZ_0001ENSG00000134049ENST00000256433ENSG00000167216ENST00000245121ENSG00000167220ENST00000300605ENST00000588183ENSG00000183791ENST00000330682ENSG00000206181ENST00000332567ENST00000620522ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267228ENST00000588705ENSG00000267724ENST00000591183ENSG00000275553ENST00000614938ENSG00000278674ENST00000611323ENSG00000279367ENST00000625076ENSG00000280212ENST00000623573CIL_0008DZ_0002ENSMUSG00000025420ENSMUST00000026486ENSMUST00000123650ENSMUST00000125744ENSMUST00000126153ENSMUST00000135029ENSMUST00000137354ENSMUST00000137498ENSMUST00000138336ENSMUST00000154053ENSMUST00000154665ENSMUSG00000025423ENSMUST00000114776ENSMUST00000114777ENSMUST00000168882ENSMUSG00000090000ENSMUST00000026487ENSMUST00000128679ENSMUST00000136800ENSMUST00000152369ENSMUSG00000091519ENSMUST00000166956
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134049 ENST00000256433 N/A 2.700±0.00 N/A 1.562±0.00 N/A N/A 4.946±0.00 11.990±0.00 N/A 5.196±0.00 N/A 4.454±1.52 4.043±0.23 8.521±0.00
ENSG00000167216 ENST00000245121 N/A N/A 1.660±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000356157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167220 ENST00000300605 N/A N/A N/A 7.984±5.07 N/A N/A N/A N/A 1.462±0.00 N/A N/A N/A 2.309±0.00 N/A
ENST00000586546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588183 N/A N/A N/A 4.367±2.73 N/A N/A N/A N/A N/A 3.295±0.00 N/A 4.863±0.00 2.625±0.00 5.441±0.00
ENST00000588861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183791 ENST00000330682 N/A N/A N/A 0.089±0.04 N/A N/A N/A N/A 0.037±0.00 N/A N/A 0.033±0.01 N/A 0.019±0.00
ENSG00000206181 ENST00000332567 N/A N/A 0.092±0.00 0.065±0.00 N/A 0.045±0.00 0.023±0.02 N/A N/A N/A N/A N/A N/A 1.373±0.73
ENST00000620522 0.048±0.00 N/A 0.029±0.00 N/A N/A 0.038±0.00 N/A 0.237±0.22 N/A N/A N/A N/A N/A 0.184±0.00
ENSG00000215474 ENST00000400404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.638±0.00
ENST00000425639 N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.854±0.00
ENST00000620245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.685±0.04
ENSG00000267228 ENST00000588705 N/A N/A 15.834±0.00 N/A 8.848±0.00 6.977±0.00 6.405±0.00 9.969±0.00 N/A 7.676±0.00 2.207±0.00 15.807±6.60 27.035±0.00 30.270±0.00
ENST00000602459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267724 ENST00000591183 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.880±0.00 N/A N/A N/A N/A
ENSG00000275553 ENST00000614938 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000278674 ENST00000611323 N/A N/A 0.037±0.00 N/A N/A 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279367 ENST00000625076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSG00000280212 ENST00000623573 0.025±0.00 1.267±0.00 N/A 0.171±0.00 0.157±0.00 N/A 0.280±0.00 0.139±0.00 N/A N/A N/A 0.347±0.06 0.087±0.00 0.685±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025420 ENSMUST00000026486 N/A N/A N/A N/A N/A 0.161±0.00 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000122984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123650 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A 0.106±0.01 N/A N/A N/A
ENSMUST00000125744 N/A N/A N/A N/A N/A 0.096±0.00 N/A 0.113±0.00 N/A N/A 0.185±0.03 0.576±0.00 N/A N/A
ENSMUST00000126153 0.263±0.08 0.264±0.04 N/A 1.625±0.14 0.218±0.16 N/A N/A 0.074±0.00 0.092±0.06 0.218±0.12 0.097±0.00 0.766±0.37 0.396±0.18 27.155±8.86
ENSMUST00000135029 0.140±0.00 N/A 0.074±0.00 N/A 0.158±0.00 N/A N/A 0.037±0.01 0.030±0.01 0.238±0.08 0.071±0.00 0.428±0.32 0.176±0.11 N/A
ENSMUST00000137354 N/A 0.088±0.00 N/A 1.234±0.00 0.153±0.00 0.092±0.02 N/A 0.066±0.00 N/A N/A 0.179±0.01 0.392±0.17 N/A N/A
ENSMUST00000137498 0.224±0.00 0.168±0.00 N/A N/A 0.179±0.10 N/A N/A 0.091±0.00 0.015±0.00 N/A 0.087±0.01 0.551±0.34 0.575±0.00 N/A
ENSMUST00000138336 N/A 0.360±0.00 N/A N/A 0.362±0.00 0.153±0.00 N/A N/A N/A 0.413±0.00 0.138±0.04 N/A N/A N/A
ENSMUST00000154053 0.387±0.00 0.593±0.23 N/A N/A 0.586±0.32 0.302±0.14 0.137±0.07 0.182±0.08 0.131±0.00 0.514±0.19 0.327±0.00 1.282±0.43 0.222±0.00 N/A
ENSMUST00000154665 N/A 0.087±0.00 0.059±0.00 1.672±0.04 0.150±0.03 0.069±0.00 N/A 0.039±0.00 0.078±0.04 N/A 0.072±0.00 0.626±0.29 0.179±0.03 N/A
ENSMUSG00000025423 ENSMUST00000114776 N/A 3.891±0.00 N/A N/A N/A N/A N/A N/A 1.890±0.00 2.169±0.00 N/A 4.656±1.89 3.913±1.98 96.601±27.93
ENSMUST00000114777 4.395±1.88 8.565±2.27 7.652±0.09 12.945±6.73 7.987±3.87 5.184±0.61 3.425±0.95 11.247±3.77 5.712±0.75 6.775±1.99 7.882±0.90 9.160±3.40 4.482±2.48 16.240±7.30
ENSMUST00000168882 4.136±0.85 4.423±0.32 N/A N/A 4.402±1.21 2.206±0.75 1.179±0.64 3.799±0.58 1.230±0.32 3.368±1.30 N/A 3.428±1.64 0.854±0.06 16.347±0.00
ENSMUSG00000090000 ENSMUST00000026487 14.036±3.29 12.405±2.61 27.672±3.13 28.196±11.99 15.351±6.09 18.903±4.55 12.158±0.95 13.465±3.34 11.186±4.38 22.348±1.99 16.332±1.08 20.873±4.64 25.309±6.42 13.125±6.05
ENSMUST00000128679 N/A 17.829±5.14 N/A N/A 16.665±6.04 33.707±8.57 38.024±3.49 33.014±9.90 32.674±6.01 35.157±5.13 N/A 16.986±0.00 73.321±2.47 57.453±7.94
ENSMUST00000136800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.513±1.52
ENSMUST00000152369 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.966±0.00 N/A
ENSMUSG00000091519 ENSMUST00000166956 N/A N/A N/A 0.590±0.50 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.022±0.02

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