C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immediate early response 3 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588705 IER3IP1-001 ENSG00000267228 9606 - 18:47134656-47176281 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000588705
Transcript ID Bladder Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000588705 15.834±0.00 8.848±0.00 6.977±0.00 6.405±0.00 9.969±0.00 7.676±0.00 2.207±0.00 15.807±6.60 27.035±0.00 30.270±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DZ CIL_0008DZ_0001 VISTA 18:46943900-47544913
CIL_0000B0 CIL_0000B0_0002 CGP 18:47107403-47176281

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:2000269 IMP regulation of fibroblast apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026487 Ier3ip1-001 protein_coding Mus_musculus 0 359
ENSMUST00000128679 Ier3ip1-003 retained_intron Mus_musculus 0 274
ENSMUST00000142456 Hdhd2-007 nonsense_mediated_decay Mus_musculus 0 274
ENSMUST00000152369 Ier3ip1-004 retained_intron Mus_musculus 0 241
ENSMUST00000136800 Ier3ip1-002 processed_transcript Mus_musculus 0 241
ENSMUST00000178715 Gm10784-201 protein_coding Mus_musculus 0 239
ENSMUST00000156454 Hdhd2-004 protein_coding Mus_musculus 0 222
ENSMUST00000097521 Hdhd2-202 protein_coding Mus_musculus 0 220
ENSMUST00000097522 Hdhd2-203 protein_coding Mus_musculus 0 220
ENSMUST00000143910 Hdhd2-006 protein_coding Mus_musculus 0 220
ENSMUST00000150990 Hdhd2-005 protein_coding Mus_musculus 0 220
ENSMUST00000147332 Hdhd2-002 protein_coding Mus_musculus 0 220
ENSMUST00000145634 Hdhd2-001 protein_coding Mus_musculus 0 220
ENSMUST00000026485 Hdhd2-201 protein_coding Mus_musculus 0 219
ENSMUST00000148955 Hdhd2-003 protein_coding Mus_musculus 0 219

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