C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589372 UBL5-005 ENSG00000198258 9606 + 19:9827926-9830076 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryENST00000589372
Transcript ID Bladder Ovary
ENST00000589372 0.439±0.00 0.375±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UP CIL_0000UP_0001 CGP 19:9810267-9830115
CIL_0005J0 CIL_0005J0_0001 CGP 19:9827892-9849682

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000161882 Ubl5-008 protein_coding Mus_musculus 0 243
ENSMUST00000160682 Ubl5-012 protein_coding Mus_musculus 0 237
ENSMUST00000129414 Ubl5-001 protein_coding Mus_musculus 0 237
ENSMUST00000161887 Ubl5-003 protein_coding Mus_musculus 0 228
ENSMUST00000160874 Ubl5-007 nonsense_mediated_decay Mus_musculus 0 219
ENSMUST00000160124 Ubl5-009 protein_coding Mus_musculus 0 211
ENSMUST00000162303 Ubl5-004 protein_coding Mus_musculus 0 209
ENSMUST00000161486 Ubl5-005 protein_coding Mus_musculus 2e-40 171
ENSMUST00000161595 Ubl5-006 retained_intron Mus_musculus 1e-33 148
ENSMUST00000154429 Ubl5-002 retained_intron Mus_musculus 3e-29 134
ENSMUST00000161834 Ubl5-011 protein_coding Mus_musculus 0.000000000002 79
ENSMUST00000171561 Mms19-001 protein_coding Mus_musculus 0.00000000007 73
ENSMUST00000167927 Mms19-006 nonsense_mediated_decay Mus_musculus 0.00000000007 73
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.00000001 66

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