C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Wilms tumor 1 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590071 WTIP-001 ENSG00000142279 9606 + 19:34481638-34512304 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000590071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000590071 1.158±0.00 0.220±0.00 0.174±0.00 0.235±0.20 1.052±0.79 0.447±0.37 0.313±0.21 0.385±0.35 0.182±0.05 0.691±0.52 0.200±0.06 1.173±0.91 0.495±0.10 0.964±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000932 IDA cytoplasmic mRNA processing body
GO:0001666 IDA response to hypoxia
GO:0003714 IEA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007010 IMP cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0022604 IMP regulation of cell morphogenesis
GO:0030054 IEA cell junction
GO:0035195 IMP gene silencing by miRNA
GO:0035331 IDA negative regulation of hippo signaling
GO:2000637 IMP positive regulation of gene silencing by miRNA

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038537 Wtip-001 protein_coding Mus_musculus 0 1062
ENSMUST00000140911 Wtip-002 retained_intron Mus_musculus 0 518
ENSMUST00000123813 Wtip-004 retained_intron Mus_musculus 0 348
ENSMUST00000187978 Carf-001 protein_coding Mus_musculus 0.0009 53

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