C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 554
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590116 ZNF554-002 ENSG00000172006 9606 + 19:2819919-2835471 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000590116
Transcript ID Adipose Bladder Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000590116 0.250±0.00 0.250±0.00 1.164±0.00 0.370±0.00 0.603±0.00 0.606±0.00 0.978±0.33 0.354±0.00 0.568±0.46 0.277±0.00 1.209±0.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 4e-25 121
ENSDART00000106246 CABZ01006835.1-201 protein_coding Danio_rerio 0.0000003 62
ENSDART00000133285 si:dkey-15h8.16-005 retained_intron Danio_rerio 0.0000003 62
ENSDART00000144888 si:dkey-15h8.16-003 processed_transcript Danio_rerio 0.0000003 62
ENSDART00000139025 si:dkey-15h8.16-006 processed_transcript Danio_rerio 0.0000003 62
ENSDART00000133211 si:dkey-15h8.16-001 protein_coding Danio_rerio 0.0000003 62
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000001 60
ENSDART00000153884 si:ch73-144d13.5-001 protein_coding Danio_rerio 0.0002 53

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