C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: programmed cell death 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590247 PDCD5-001 ENSG00000105185 9606 + 19:32581068-32587427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000590247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000590247 22.605±0.00 26.769±0.00 0.912±0.00 12.036±4.23 20.305±14.96 13.284±11.15 25.901±19.96 16.574±8.42 7.791±4.50 9.149±5.89 18.606±14.18 44.078±22.83 33.017±5.65 50.920±14.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006915 IEA apoptotic process
GO:0043065 IMP positive regulation of apoptotic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118501 Pdcd5-001 protein_coding Mus_musculus 0 542
ENSMUST00000120714 Pdcd5-003 protein_coding Mus_musculus 0 455
ENSMUST00000126734 Pdcd5-006 retained_intron Mus_musculus 0 291
ENSMUST00000130306 Pdcd5-005 retained_intron Mus_musculus 0 254
ENSMUST00000127213 Pdcd5-004 retained_intron Mus_musculus 0 241
ENSMUST00000151336 Pdcd5-007 retained_intron Mus_musculus 2e-38 163

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