C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 253
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592725 ZNF253-004 ENSG00000256771 9606 + 19:19865886-19892083 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMuscleOvaryPlacentaTestisENST00000592725
Transcript ID Bladder Brain Liver Lung Muscle Ovary Placenta Testis
ENST00000592725 0.817±0.00 1.791±0.00 1.220±0.00 1.491±0.00 0.824±0.00 1.853±0.00 0.756±0.00 1.508±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0001 CGP 19:19785839-19894674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 0 202
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 0 202
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 0 193
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 0 193
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 5.60519e-45 185
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 8.00141e-43 178
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 8.00141e-43 178
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 8.00141e-43 178
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 8.00141e-43 178
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 8.00141e-43 178
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 5e-40 169
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 2e-39 167
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 8e-38 161
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 8e-38 161
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 1e-36 158
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 1e-36 158
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 1e-35 154
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 2e-34 150
ENSMUST00000073312 Zfp760-201 protein_coding Mus_musculus 7e-29 132
ENSMUST00000167740 Zfp946-201 protein_coding Mus_musculus 2e-24 117
ENSMUST00000088763 Zfp946-002 protein_coding Mus_musculus 2e-24 117
ENSMUST00000120222 Zfp946-001 protein_coding Mus_musculus 2e-24 117
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 7e-24 115
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 7e-24 115
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 7e-24 115
ENSMUST00000165705 Zfp583-201 protein_coding Mus_musculus 7e-24 115
ENSMUST00000108560 Zfp583-002 protein_coding Mus_musculus 7e-24 115
ENSMUST00000062765 Zfp583-001 protein_coding Mus_musculus 7e-24 115
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 2e-23 113
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 1e-20 104
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 1e-20 104
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 1e-20 104
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 3e-17 94
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 4e-16 90
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 0.000000000000005 86
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 0.000000000000005 86
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 0.00000000000002 84
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 0.00000000000002 84
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 0.0000000000009 79
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0.0000000001 71
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 0.000000002 68
ENSMUST00000082203 Zfp934-201 protein_coding Mus_musculus 0.000000007 66
ENSMUST00000101547 Zfp934-202 protein_coding Mus_musculus 0.000000007 66
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 0.000000007 66
ENSDART00000128358 si:ch73-367f21.5-201 protein_coding Danio_rerio 0.00000009 62
ENSDART00000151336 si:ch73-367f21.5-001 protein_coding Danio_rerio 0.00000009 62
ENSDART00000112810 BX248128.3-202 protein_coding Danio_rerio 0.0000003 60
ENSDART00000129267 BX248128.3-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000137775 CR356223.5-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000124296 zgc:171626-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000150868 zgc:171626-001 protein_coding Danio_rerio 0.0000003 60
ENSDART00000121557 CABZ01024856.1-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000142456 si:ch211-152l15.4-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000150372 si:ch211-152l15.4-001 protein_coding Danio_rerio 0.0000003 60
ENSDART00000147415 BX571760.3-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000128867 si:dkey-156k2.6-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000150403 si:dkey-156k2.6-001 protein_coding Danio_rerio 0.0000003 60
ENSDART00000155466 si:ch211-234c11.1-201 protein_coding Danio_rerio 0.0000003 60
ENSDART00000121915 si:ch211-234c11.1-002 protein_coding Danio_rerio 0.0000003 60
ENSDART00000131561 si:dkey-16p19.3-201 protein_coding Danio_rerio 0.0000003 60
ENSMUST00000107989 Gm3604-201 protein_coding Mus_musculus 0.000001 58
ENSMUST00000187656 Gm3604-001 protein_coding Mus_musculus 0.000001 58
ENSDART00000130580 CABZ01036080.1-201 protein_coding Danio_rerio 0.000004 57

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