C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 130
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593174 CCDC130-003 ENSG00000104957 9606 + 19:13747864-13763279 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000593174
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000593174 3.434±0.00 8.556±0.00 8.104±0.00 3.697±3.11 1.452±0.00 7.159±0.00 1.268±0.00 5.111±0.00 15.884±0.18 7.544±0.00 3.273±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005120 Ccdc130-002 protein_coding Mus_musculus 0 536
ENSMUST00000098578 Ccdc130-001 protein_coding Mus_musculus 0 536
ENSMUST00000172320 Ccdc130-006 nonsense_mediated_decay Mus_musculus 0 364
ENSMUST00000166285 Ccdc130-007 retained_intron Mus_musculus 0 302
ENSMUST00000164476 Ccdc130-003 retained_intron Mus_musculus 0 257
ENSMUST00000166728 Ccdc130-005 retained_intron Mus_musculus 5e-18 97
ENSMUST00000163993 Ccdc130-004 protein_coding Mus_musculus 0.0000000003 71

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