C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000595195 CTD-2542C24.2-001 ENSG00000269779 9606 + 19:20691336-20697615 unprocessed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000595195
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000595195 0.037±0.00 0.010±0.00 0.038±0.00 0.034±0.00 0.029±0.00 0.036±0.00 0.058±0.05 0.008±0.00 0.043±0.03 0.008±0.00 0.057±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064B CIL_00064B_0009 CGP 19:20535825-20863281

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167565 Zfp712-201 protein_coding Mus_musculus 0 440
ENSMUST00000012725 Zfp273-002 protein_coding Mus_musculus 0 401
ENSMUST00000181391 Zfp273-001 protein_coding Mus_musculus 0 401
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 0 381
ENSMUST00000137496 Zfp738-001 protein_coding Mus_musculus 0 372
ENSMUST00000190566 Zfp708-002 protein_coding Mus_musculus 0 331
ENSMUST00000109742 Zfp708-001 protein_coding Mus_musculus 0 331
ENSMUST00000109743 RSLCAN18-202 protein_coding Mus_musculus 0 331
ENSMUST00000186303 RSLCAN18-001 nonsense_mediated_decay Mus_musculus 0 331
ENSMUST00000185856 RSLCAN18-004 processed_transcript Mus_musculus 0 331
ENSMUST00000091520 Zfp85-201 protein_coding Mus_musculus 0 320
ENSMUST00000144183 Zfp85-001 protein_coding Mus_musculus 0 320
ENSMUST00000045969 Zfp458-201 protein_coding Mus_musculus 0 195
ENSMUST00000167914 Gm26965-001 nonsense_mediated_decay Mus_musculus 1.4013e-45 189
ENSMUST00000091523 Zfp58-004 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000076123 Zfp58-001 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000171518 Zfp58-002 protein_coding Mus_musculus 1.4013e-45 189
ENSMUST00000049705 Zfp457-201 protein_coding Mus_musculus 5.60519e-45 187
ENSMUST00000075255 Zfp874a-001 protein_coding Mus_musculus 2e-38 165
ENSMUST00000180580 Zfp874a-002 nonsense_mediated_decay Mus_musculus 2e-38 165
ENSMUST00000109732 Zfp429-001 protein_coding Mus_musculus 3e-27 128
ENSMUST00000181071 Zfp429-002 protein_coding Mus_musculus 3e-27 128
ENSMUST00000063704 Gm13152-201 protein_coding Mus_musculus 1e-21 110
ENSMUST00000105721 Gm13152-001 protein_coding Mus_musculus 1e-21 110
ENSMUST00000080249 Zfp947-001 protein_coding Mus_musculus 0.00000000004 75
ENSMUST00000122051 Znf41-ps-001 unprocessed_pseudogene Mus_musculus 0.0000000005 71
ENSMUST00000105733 Gm13251-001 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000084149 Gm13139-001 protein_coding Mus_musculus 0.0000000005 71
ENSMUST00000107554 Zkscan16-001 protein_coding Mus_musculus 0.00001 57
ENSMUST00000019572 Zfp874b-001 protein_coding Mus_musculus 0.00005 55

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