C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 2, sigma 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601649 AP2S1-003 ENSG00000042753 9606 - 19:46838447-46850766 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000601649
Transcript ID Brain
ENST00000601649 13.153±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008G1 CIL_0008G1_0001 VISTA 19:46806794-47408636

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 NAS transporter activity
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006897 IEA endocytosis
GO:0007173 TAS epidermal growth factor receptor signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007411 TAS axon guidance
GO:0008565 NAS:IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016032 TAS viral process
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030100 TAS regulation of endocytosis
GO:0030122 TAS AP-2 adaptor complex
GO:0030666 TAS endocytic vesicle membrane
GO:0030669 TAS clathrin-coated endocytic vesicle membrane
GO:0042059 TAS negative regulation of epidermal growth factor receptor signaling pathway
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0048268 TAS clathrin coat assembly
GO:0050690 TAS regulation of defense response to virus by virus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000141496 Ap2s1-002 retained_intron Mus_musculus 0 246
ENSMUST00000086112 Ap2s1-001 protein_coding Mus_musculus 0 246
ENSDART00000033871 ap2s1-001 protein_coding Danio_rerio 5.60519e-45 183

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